KEGG   Bipolaris oryzae: COCMIDRAFT_82600
Entry
COCMIDRAFT_82600  CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K10881  26 proteasome complex subunit DSS1
Organism
bor  Bipolaris oryzae
Pathway
bor03050  Proteasome
bor03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    COCMIDRAFT_82600
  09124 Replication and repair
   03440 Homologous recombination
    COCMIDRAFT_82600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bor03019]
    COCMIDRAFT_82600
   04131 Membrane trafficking [BR:bor04131]
    COCMIDRAFT_82600
   03051 Proteasome [BR:bor03051]
    COCMIDRAFT_82600
   03400 DNA repair and recombination proteins [BR:bor03400]
    COCMIDRAFT_82600
Messenger RNA biogenesis [BR:bor03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     COCMIDRAFT_82600
Membrane trafficking [BR:bor04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    COCMIDRAFT_82600
Proteasome [BR:bor03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     COCMIDRAFT_82600
DNA repair and recombination proteins [BR:bor03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     COCMIDRAFT_82600
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 19126089
NCBI-ProteinID: XP_007683327
JGI: Cocmi1_82600
UniProt: W6ZJI4
Position
Unknown
AA seq 93 aa
MSGSAQGSNDMKKAVTSDSKNGEQPLAPEKKPATQLEEDDEFEDFPVEGPDWTEEETQIP
NGNTHLWEESWDDDDTNDDFAVQLREELKKLGK
NT seq 282 nt   +upstreamnt  +downstreamnt
atgtccggctcagcgcaaggaagcaacgatatgaagaaggccgtaaccagcgactcgaag
aacggcgagcaaccgctggcaccggagaagaagcctgcgacacaacttgaggaggatgac
gagtttgaggactttcctgtcgaagggccagactggacagaagaggagacccagatcccc
aacggcaacacacacctgtgggaggagagctgggatgatgatgacacgaatgatgacttt
gctgtacagcttagggaggagctgaagaagctgggcaaatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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