KEGG   Bipolaris oryzae: COCMIDRAFT_96926
Entry
COCMIDRAFT_96926  CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K14315  nucleoporin NDC1
Organism
bor  Bipolaris oryzae
Pathway
bor03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCMIDRAFT_96926
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bor03019]
    COCMIDRAFT_96926
Messenger RNA biogenesis [BR:bor03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     COCMIDRAFT_96926
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 19128946
NCBI-ProteinID: XP_007688551
JGI: Cocmi1_96926
UniProt: W6ZMY7
Position
Unknown
AA seq 637 aa
MTLAQLGTQVRPYRDYLTPALHRRFNRASKYTLLLCYAIACWMGEWANPLWSFFPLGLTG
IRTLLLFLSALSVYVLRVSQWHVGPRQTPTQAQTFTKYFFRLSTIVTLVAYAFSAMMFVE
TYIWSRGPKDRLAFIEAGRMHERFRLNERPLYLRYSFYLLAVAQSCVHLWRDYDRIDVPA
MKPKKDRGDAAPARRAPKPRHVLIKNFKGMATKSSSLVTIITIIGFIFYFTITRNLIWSY
YYSLGRYLWSLSKTSTPTGLAPFLPLCLMFITEGTLLVLLWEFVNKTFDVYIAQEPLKND
NPITNDSKDPNGSLLNGLKSKKDTVKAIAFWELALITDAFPDRRKTLYSEMDRKKAPTHQ
QVTDLCLGELKFLIERLSVGLDPAYNPVVGDGKEQSAAPVNLIPRISQPLKDDKAIAAPP
PKPNSRLEHFEAATADLAKSHSAPGNAQKAYSREAINKGLSKAQEGAKEAESLFTTYYNK
FVSSSVGALFRQSVQRTASIVVLGAPYSRISLICNAVTSLANLAVSSLSEDSLGRFHEGI
PAMVRVLTIALNKLDEYMEIVPIHPSDIETLAKPEAERRKVPEVNEVRECLREGLERILG
SFNEYLSSMGLSRLEIMEAKKAASAKKAPEMIQAGGR
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgacgctcgcacagctgggcactcaagtgcgcccgtacagagactacctgacaccagct
ctccaccgcaggttcaacagggcgagcaaatacaccttgttgctctgctacgcgatcgcg
tgttggatgggcgaatgggctaaccctctatggtcgttttttccactaggccttacaggc
atccgaacacttctgctattcctctccgcgctttccgtctacgtccttcgcgtttcccaa
tggcacgtcggcccccgccagacacctacccaggcccagacgttcaccaagtacttcttt
cgcctgtccactatcgttactctcgtcgcctatgccttttccgctatgatgtttgtcgag
acgtatatctggtcgaggggccctaaggacagactcgcattcatcgaggctgggcgcatg
cacgagcggttcaggctgaacgagagaccgctctacctgcgctactctttctaccttctc
gcagtcgcgcagtcctgtgttcacctatggagagactatgacaggattgatgtgccggca
atgaagcccaagaaggaccgtggcgacgctgcaccggcgcgacgagcacccaagcccaga
catgtgctcatcaaaaatttcaagggcatggcaaccaagtcgagctcgctggttaccatc
atcactattattggatttatcttctacttcacaatcacgcgcaacctgatctggagttat
tattacagcctcggtcgctatctctggagcctttccaagacctccactcccaccggccta
gctcctttcttacctctgtgtctgatgttcattaccgagggaacgcttctggtcctacta
tgggagtttgtcaacaagactttcgacgtgtacattgcgcaggagccgctgaagaatgac
aatcccattacaaacgattcaaaagaccctaacggctcgctcttgaatgggctcaaatcg
aagaaggacactgtcaaggcaatcgctttctgggagcttgctctcatcacagacgctttc
cccgaccgccgtaagacgctatacagtgagatggatcgcaaaaaggcgcctacccaccag
caagttacagacttgtgtctcggagagttgaagtttctcatcgaacgcctaagtgttggt
ctcgatcctgcgtacaacccggtcgttggagacggcaaagagcaatcggcggcacctgtc
aacctgataccacggatttcacagccactcaaggacgacaaagcgattgcagcaccgcca
ccaaagccaaactctcgattggagcatttcgaagcagcaacagcggatctcgcaaagtct
cacagcgctcctggcaatgcccaaaaagcgtacagccgagaggctatcaacaaagggctg
agcaaggcacaagagggtgctaaagaggcggagtcgctcttcacaacatactacaacaag
ttcgtgtcttcatcggttggcgctcttttcagacagtccgttcaacgtacagcaagcatt
gttgttctcggagcgccatactcgcgaatttcgttgatttgcaacgccgtcacttccctt
gcgaatctggccgtgtcctctcttagcgaagactctctcggccgttttcacgaaggtatt
ccggctatggtgcgtgtgcttactatagcactcaacaagctcgacgagtacatggagata
gttccgatacacccaagcgatatcgaaacacttgccaaaccagaagcagagaggagaaag
gtacccgaggtgaatgaagtcagggaatgtcttcgagaaggattggagcggatcctcggt
agcttcaatgagtatctgagtagtatgggactcagcagactggagattatggaggcaaaa
aaggcggcgagtgccaaaaaagcacctgagatgattcaggccgggggaagatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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