KEGG B.parapertussis: BPP0701

Bordetella parapertussis: BPP0701

Entry

BPP0701 CDS B.parapertussis

Gene name glyA

Definition serine hydroxymethyltransferase (EC:2.1.2.1)

Orthology K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]

Pathway bpa00260 Glycine, serine and threonine metabolism
bpa00460 Cyanoamino acid metabolism
bpa00670 One carbon pool by folate
bpa00680 Methane metabolism
bpa01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Methane metabolism [PATH:bpa00680]
Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:bpa00260]
Metabolism; Metabolism of Other Amino Acids; Cyanoamino acid
metabolism [PATH:bpa00460]
Metabolism; Metabolism of Cofactors and Vitamins; One carbon pool by
folate [PATH:bpa00670]

SSDB

Motif Pfam: SHMT DegT_DnrJ_EryC1 Beta_elim_lyase
PROSITE: SHMT

Other DBs NCBI-GI: 33595398
NCBI-GeneID: 1668395
GeneDB: BPP0701
UniProt: Q7W1I6

Position complement(738684..739976)

AA seq 430 aa
MNDLLPAAAAPAGARALPLRHADPEIWRAVDAERQRQMHSIELIASENFVSQAVLDAQGS
VMTNKYAEGYPGRRYYGGCRHVDVAERAAIERARRLFGCEYANVQPHSGSQANQAVYLAL
LAPGDRILGLDLKAGGHLTHGARVNLSGKWFEALSYGVDPVSHRIDMDEVERTARRERPR
LIIAGGSAYARVPDFARFRAIADATGALFVADMAHYAGLVAGGAFPSPVPFAHVTTTTTH
KTLRGPRGGMILTDDADIARRIDAAVFPGLQGGPLMHVIAAKAVALGEALQPGFRAYARA
VIDNARALCARLAEGGLSIVSGGTDCHLGVVDLRPWGLAGNAAERALEEAGITVNKNAVP
GDAASPAVTSGIRVGSAACTSRGMGPAEFRQIGDLVLAVLGGLRDGGQAGGRDAVPARAA
ELSRRFPLPY

NT seq 1293 nt +upstreamnt +downstreamnt
atgaacgacctgcttcccgccgccgccgcgcccgccggcgcgcgcgcgctgcccctgcgg
catgccgaccccgaaatctggcgcgccgtcgacgccgagcgccagcggcaaatgcactcg
atcgaactgatcgcctccgagaacttcgtcagccaggccgtgctcgacgcgcagggctcg
gtcatgacgaacaagtacgccgagggctatccgggccgccgctactatggcggctgccgc
cacgtcgacgttgccgagcgggccgccatcgagcgcgcccggcgcctgttcggctgcgaa
tacgcgaacgtgcagccgcactccggcagccaggccaaccaggccgtatacctcgccctg
ctcgcgcccggcgaccgcatcctcggcctggacctcaaggcgggcgggcacctcacccat
ggcgcgcgcgtcaacctgtcgggcaagtggttcgaggcgctgagctacggcgtcgacccc
gtgtcgcaccgcatcgacatggacgaggtcgagcgcacggcccggcgcgagcggccgcgg
ctcatcatcgccggcggctcggcctatgcgcgcgtgccggatttcgcgcgctttcgcgcc
atcgccgacgcgaccggcgccctgttcgtggccgacatggcccactatgccggcctggtg
gccggcggcgcgttcccctcgccggtgccgttcgcccacgtgaccacgaccaccacccac
aagaccctgcgcggaccgcgcggcggcatgattctcaccgacgacgccgacatcgcccgg
cgcatcgacgccgcggtgttccccggcctgcagggcggcccgctgatgcatgtcatcgcc
gccaaggccgtggccctgggcgaggcgctgcagcccggcttccgcgcctacgcgcgcgcc
gtgatcgacaacgcccgtgcgctgtgcgcgcgcctggccgaaggcggcctgtccatcgtc
tcgggaggcaccgactgccacctcggcgtggtcgacctgcggccgtgggggctagccggc
aacgccgccgaacgggcgctggaagaagccggcatcaccgtgaacaagaacgccgtcccg
ggcgacgccgccagccccgccgtcacctccggcatccgggtaggcagcgcggcctgcacc
agccgcggcatggggccggccgagttccggcagatcggcgacctggtcctggccgtgctg
ggcggcctgcgcgatggcggccaggccggcggccgcgacgccgtgcccgcgcgggcggcc
gagctgagccggcgctttccgctgccgtactga

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   GENEDB-BPA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (3)   
   PROSITE (1)   
All databases (20)

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