KEGG B.parapertussis: BPP1640

Bordetella parapertussis: BPP1640

Entry

BPP1640 CDS B.parapertussis

Gene name dnaE2

Definition error-prone DNA polymerase (EC:2.7.7.7)

Orthology K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]

Pathway bpa00230 Purine metabolism
bpa00240 Pyrimidine metabolism
bpa01100 Metabolic pathways
bpa03030 DNA replication
bpa03430 Mismatch repair
bpa03440 Homologous recombination

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:bpa00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:bpa00240]
Genetic Information Processing; Replication and Repair; DNA
replication [PATH:bpa03030]
Genetic Information Processing; Replication and Repair; Mismatch
repair [PATH:bpa03430]
Genetic Information Processing; Replication and Repair; Homologous
recombination [PATH:bpa03440]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: DNA_pol3_alpha PHP tRNA_anti
PROSITE: PHOSPHOTRIESTERASE_2

Other DBs NCBI-GI: 33596275
NCBI-GeneID: 1664660
GeneDB: BPP1640
UniProt: Q7W9W1

Position complement(1749271..1752429)

AA seq 1052 aa
MSAILPGYAELHCQSNFSFLQGASHPEELVTRAGELGYAALALTDECSLAGVVRAHVEAR
EQKLPLIIGSSFTLQAGADAPPLDLTLLAQNREGYGNLAELITLGRGRAAKGQYLLTPAD
IEAPAGDNAHLRGMPDCLAILAPPPGLAAERLAEQARWLAAQCPGRAWIGLTLLHHCRDD
LHRAAVEHAAHASGLPIVALGQAQMHRRSRKPLHDTLAAIRTGRSVGQCGYDLAANAERH
LRSRLRLASLYPAQALAQTLAIARRCTFSLDELQYEYPDEIVPAGHTPASYLRQQTYLGA
RQRFPEGMTPAVAAQVEKELALINELRYEAYFLTVYDIVGYARSQGILCQGRGSAANSAV
CYCLGITAVDPARGNTLFERFISKERNEPPDIDVDFEHQRREEVIQYIYEKYGRQRAALT
AVVISYRPRSVLRDTGRALGVDNGIIDAVARAHQWWDGKKEMLRSLAACGLDPASRVARQ
WAELAETLMGFPRHLSQHPGGFVISRGKLSRLVPIENAAMPGRSVVQWDKDDLDALRLLK
VDVLALGMLSVLRRALALAGQRRGRPLALHEIPPDDDATYDMICAADTIGVFQIESRAQM
SMLPRLRPRQYYDLVVQVAIVRPGPIQGGMVPPYLRRRQGREDITYPGPAVRKALARTLG
VPIFQEQVMQIAVDAAGFTPGEADALRRSMAAWRRKGGVDKFRAQLVGGLLARNYTADFA
QALFRQIEGFGEYGFPESHAASFALLAYASSWLKCHEPEAFLAALLNSQPMGFYAPAQLV
QDARRHGVRVLPADVLYSGWEASLQDAPGAARPAVRLGLNLVKGLREDSARAIEQARVRR
PFADTADMARRAGLPRQALDALAAADALRTLAGHRRLASWQAAASAQSRDLLREAVIVET
ETPALPAPSEGQTVAADYRSVGLTLGRHPLALLRPQLAARNFQTAAVLNTYPNRRLARAC
GIVTVRQRPQTAKGTIFVTLEDETGPINAVVRPELIERQRRELLDATLLGIYGTWQSVDG
VRHLVAQRLVDLSSLLGQLSQDGLAAASRNFH

NT seq 3159 nt +upstreamnt +downstreamnt
atgtccgccatcctgcccggctacgccgaactgcattgccaatcgaacttctcgttcctg
cagggcgcctcgcatcccgaggaactggtcacgcgggcgggcgaactcggctacgccgcg
ctggccctgaccgacgaatgttcgctggccggcgtggtgcgcgcccacgtcgaggcgcgc
gaacagaaactgccgctcatcatcggcagcagcttcaccctgcaggccggtgccgacgcg
ccgccgctggacctgaccctgctggcgcagaaccgcgaaggctacggcaacctggccgaa
ctgatcacgctggggcgcggccgcgccgccaagggccagtacctgctgacgccggccgac
atcgaagcgcccgccggcgacaacgcgcatctgcgcggcatgcccgactgcctggccatc
ctggcgccgccgcccggcctggccgccgaacgcctggccgaacaagcgcgctggctggcc
gcgcaatgccccggccgcgcctggatcggcctgaccctgctgcaccattgccgcgacgac
ctgcaccgcgccgccgtcgagcacgccgcccacgccagcggcctgcccatcgtcgcactg
ggccaggcgcagatgcaccgccgttcgcgcaagcccctgcacgacacgctggcggccatc
cgcaccgggcgcagcgtcggccagtgcggctatgacctggccgccaacgccgaacgccac
ctgcgctcgcgcctgcgcctggccagcctctatccggcccaggccctggcccagacgctg
gccatcgcacggcgctgcaccttctcgctggacgaattgcaatacgaataccccgacgaa
atcgtgcccgccggccatacgcccgcctcctacctgcgccagcagacttacctgggcgcc
cggcaacgctttcccgagggcatgacgccggcggtcgccgcccaggtcgaaaaagagctc
gccctgatcaacgaactgcgctacgaggcctatttcctcacggtctacgacatcgtcggc
tacgcccgctcgcaaggcatcctgtgccagggccgcggctcggcggccaactcggcggtc
tgttattgcctgggcatcaccgcggtcgatcccgcgcgcggcaacacgctgttcgagcgc
ttcatcagcaaggagcgcaacgaaccgcccgatatcgacgtcgacttcgaacaccagcgg
cgcgaggaagtcatccagtacatctacgagaaatacggccgccagcgcgccgccctgacc
gccgtggtcatctcgtaccggccgcgcagcgtgctgcgcgataccgggcgcgcgctcggc
gtggacaacggcatcatcgacgccgtggcgcgggcgcaccaatggtgggacggcaagaag
gaaatgctgcgctcgctcgccgcctgcggcctggatccggcctcgcgggtggcgcgccaa
tgggccgagctggccgaaacgctgatgggttttccgcgccacctgtcgcagcatcccggc
ggcttcgtgatctcgcgcggcaagctgtcgcgcctggtgccgatcgaaaacgccgccatg
cccgggcgcagcgtggtgcaatgggacaaggacgatctcgacgcgctgcggctgctgaag
gtggacgtgctggcgctgggcatgctgtcggtgctgcgccgcgcgctggcgctggccggc
cagcggcgtggccggccgctggcgctgcacgagattccgcccgacgacgacgccacctac
gacatgatctgcgcggccgacacgataggcgtgttccagatcgagtcgcgcgcgcagatg
agcatgctgccgcgcctgcggccgcgccaatactacgacctggtggtgcaggtggccatc
gtgcggcccggcccgatccagggcggcatggtgcccccctacctgcggcgacgccagggg
cgcgaagacatcacctaccccgggccggcggtgcgcaaggcgctggcgcgcacgctcggc
gtgccgatcttccaggagcaggtcatgcagatcgcggtcgacgccgccggttttaccccc
ggcgaggccgacgcgctgcgccgctcgatggcggcctggcggcgcaagggcggcgtcgac
aagttccgcgcccagttggtgggcggcctgctggcacgcaactatacggcagacttcgcg
caggccctgtttcgccagatcgaaggctttggcgaatacggttttcccgaaagccatgcc
gccagcttcgcgctgctggcctatgccagctcctggctcaaatgccatgaaccggaggcc
ttcctcgcggccctgctgaattctcagcccatggggttctacgcgccggcccagctggtg
caggacgcccgccgccatggcgtgcgggtgctgccagccgatgtgctgtacagcggctgg
gaggccagcctgcaggacgcgcccggcgcggcgcggcccgccgtgcgcttgggcctgaac
ctggtcaaggggctgcgcgaggacagcgcgcgcgccatcgaacaggcgcgcgtgcgccgg
cccttcgccgataccgccgacatggcgcgccgcgccgggctgccgcgccaggcgctcgac
gcactggccgccgccgatgccttgcgcaccctggccggccatcgccgcctggccagctgg
caagcggccgccagcgcacaaagccgcgacctgctgcgcgaagccgtgatcgtcgaaacc
gaaacgcccgcgctgccggcgccgtccgaaggccagaccgtcgccgccgactaccgcagc
gtcgggctgaccctgggccgccatccgcttgcgctgctgcggccgcaactggccgcgcgc
aatttccagaccgccgcggtcctcaatacctaccccaatcgccggctggcgcgcgcctgc
ggcatcgtcacggtgcgccagcggccgcagaccgccaagggcaccatctttgtcacgctc
gaagacgaaaccggccccatcaatgccgtggtgcgtcccgagctgatcgaacggcagcgc
cgcgaactgctggacgccacgctattgggcatctacggcacctggcagagcgtcgatggc
gtgcgccacctggtggcgcagcgcctggtggacctgagcagcctgctgggccagctcagc
caggacggcctggccgccgccagccgcaacttccactga

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   GENEDB-BPA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (3)   
   PROSITE (1)   
All databases (21)

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