KEGG   Bordetella parapertussis 12822: BPP4053
Entry
BPP4053           CDS       T00140                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
bpa  Bordetella parapertussis 12822
Pathway
bpa00550  Peptidoglycan biosynthesis
bpa01100  Metabolic pathways
bpa01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:bpa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BPP4053 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    BPP4053 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:bpa01011]
    BPP4053 (mrdA)
Enzymes [BR:bpa01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     BPP4053 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:bpa01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   BPP4053 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: CAE39336
UniProt: Q7W3I2
Position
complement(4387407..4389359)
AA seq 650 aa
MFEFKKTGQQQKQRFRLRAWVGGLFALACFGVLAGRFWYLQVDRYEGFSERADRNRIAVV
PIPPRRGEILDRNGEVLARNYRTYTLEVVPAQAGNLDQLFDRLARVVYISPSDQRRFKRR
VGESSRYASLQLRNNLNDTEAAWFSAHSFEFPGVELRARWVREYPQGEAAAHVVGFIGRI
AENDIEELDKAGQLGNYRGTDVIGKKGIEKTWEAALHGRTGLEEVEVTAGGRPMRTLRRI
DPVPGSDIMLSIDLELQKLAEQAFEGRRGALVALDPDTGEVLAFVSQPSFDPNLFVDGID
VENWRRLNESPDHPLINRPLYGTYPIGSTYKPFVALAALELGKRRATDRMPDPGYFEFGG
QKFRNAGGAAYGMTDMHRAIVVSSDTYFYSLGPEIGVNALHDFSKQFGFGQITGIDLEGE
KAGVLPSTEWKRKAYKDRDRQRWYAGETISVAVGQGYNSFTLLQLAQATSTLANSGLYRR
PHLVHAIRDSRSGSVNPTEIAPDYRIPLKQENVDVIKRAMADVVRAGTARRAFAGAPYQA
AGKTGTAQVFSLRGGQYRASAIDERLRDHALFMGFAPVEQPRIAVALIVENAGWGASAAA
PIARTLFDNWLGRADAPSVVRAGAKPVAAEPEAATLELGATDGPMQERRQ
NT seq 1953 nt   +upstreamnt  +downstreamnt
atgttcgaattcaagaaaaccggccagcagcagaagcagcgctttcgcctgcgcgcctgg
gtgggcggcctgttcgcgctggcctgcttcggcgtgctggcgggccggttctggtacctg
caggtcgaccgctacgaggggttttccgagcgggcggacaggaaccgtatcgccgtcgtg
cccatcccgccgcggcgaggcgagatcctggaccgcaacggcgaagtcctggcgcgcaac
tatcgcacctataccttggaggtcgtgccggcccaggccggcaacctggaccagctgttc
gatcgcctggcgcgggtcgtgtacatcagcccgtccgaccaacgccgcttcaagcgccgg
gtgggcgaatccagccgctatgccagcctgcagctgcgcaacaacctcaacgacaccgag
gccgcctggttctcggcgcattcgttcgagttcccgggcgtcgagctgcgtgcgcgctgg
gtgcgcgaatatccgcagggcgaggccgcggcgcacgtggtcggcttcatcggccggatc
gccgagaacgacatcgaagagctggacaaggccggccagctgggcaactaccgcggcacc
gacgtcatcggcaagaagggcatcgagaaaacctgggaagccgccctgcatggccgcacc
ggcctggaagaggtcgaggtcacggccggcggacgccccatgcgcaccttgcgccgcatc
gacccggtgccgggctcggacatcatgctgtcgatcgacctggagctgcagaagctggcg
gaacaggccttcgaggggcggcgcggcgcgctggtggcgctcgatcccgataccggcgaa
gtcctggcgttcgtttcgcaaccctcgttcgatcccaacctgttcgtcgacggcatcgac
gtcgagaattggcgccgcctgaacgagtcgcccgaccatccgctgatcaaccggccgctg
tacggcacctatcccatcggctcgacctacaagccgttcgtggccctggccgcgctggag
ctgggcaagcggcgcgccaccgaccgcatgcccgatccgggctatttcgagttcggcggc
cagaaattccgcaacgccggcggcgccgcctatggcatgacggacatgcaccgcgccatc
gtggtgtcgtccgatacctatttctattcgctcggccccgagatcggcgtgaacgcgctg
cacgatttttccaagcagttcggtttcggacagatcaccggcatcgacctggagggcgag
aaggccggggtgctgccgtccaccgaatggaagcgcaaggcctacaaggatcgcgatcgc
cagcgctggtatgccggcgaaacgatttccgtggcggtcgggcagggctacaactcgttc
acgctgctgcaattggcgcaggccacctcgaccctggccaacagcggcctgtatcggcgt
ccgcacctggtgcacgcgattcgcgactcgcgctcgggctcggtcaacccgaccgagatc
gcgcccgactaccgcatcccgctcaagcaggagaacgtcgacgtgatcaagcgcgccatg
gcggacgtggtgcgcgccggcacggcgcggcgcgccttcgccggcgcgccctaccaggcc
gccggcaagaccggcaccgcgcaggtgttcagcctgcgcggcggccagtatcgcgccagc
gccatcgacgagcgcttgcgggaccacgccttgttcatggggttcgcgccggtcgagcag
ccgcgcatcgccgtggccctgatcgtggagaacgccggctggggggccagcgccgcggcg
cccatcgcgcgcaccctgttcgataattggctcggccgggccgacgcgccgtcggtggtg
cgggccggcgccaagccggtcgccgccgagcccgaggccgccaccctggaactgggcgcc
accgatggccccatgcaggagcgccgccaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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