KEGG   Bordetella parapertussis Bpp5: BN117_3002
Entry
BN117_3002        CDS       T02297                                 
Name
(RefSeq) hypothetical protein
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
bpar  Bordetella parapertussis Bpp5
Brite
KEGG Orthology (KO) [BR:bpar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bpar03009]
    BN117_3002
Enzymes [BR:bpar01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     BN117_3002
Ribosome biogenesis [BR:bpar03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BN117_3002
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-GeneID: 13891039
NCBI-ProteinID: YP_006896829
UniProt: K0MHT7
Position
complement(3243173..3244903)
AA seq 576 aa
MKFGAVPVTTNTTMQDDNSFPDNESPVAQPPVGEPAASGEAGDGEGAARARGRKLRTPFR
RRRGDAAAAGEAGADEAGSQPAAQSEGDARASERDADQALAYLDNAARIEQRLGKYLNSE
AVMPKLHKVLADAGIGSRREMEELIVAGRVSVNGEPAHIGQRVAPNDQVRVNGKPIARPN
AKKPPRVILYHKPAGEIVSHDDPGGRASVFARLPKLRTGKWLSVGRLDLNTEGLLIFTTS
GDMANRIMHPRYGTEREYAVRVLGEMDDAQRKSLTEGIELEDGKAAFGSFEYLGGDGSNR
WYRVTLQEGRNREVRRMFEAVGVTVSRLIRTRFGDIVLPRNLRRGRWEELDGSLVTALMV
QLGLLRDGDESEGRRKSRQPQSHDSALPPGFGTLERNGMNGARIGRRGKLQGGRPGSAAA
CPSDPFGTGLMITGGYANGHPLGNDSAAGRGGKGKPAKGKAGGDKPQRGQGRKAAGARGG
KKAGGRAAAPGAKGAGGRAGGNKAASAGGKAAGVAKPASPTGNRGPAAPKPQRARRGGGG
GAGGGGGGRGDDWQPKGAGAHESRLGFMGGRGGRGR
NT seq 1731 nt   +upstreamnt  +downstreamnt
ttgaaattcggagctgtcccagtgacaacgaatacaacgatgcaagacgacaattccttt
cccgacaatgaatccccggtggcgcagccgcccgttggcgagcccgccgcatccggcgag
gccggcgacggcgagggcgcagcccgggcgcgtggccgcaagctgcgcacgccgtttcgc
cgccgccgcggcgacgcggccgccgccggcgaagccggcgccgacgaggcgggcagccag
cccgccgcccagtccgagggcgatgcccgcgccagcgagcgcgatgccgaccaggcgctg
gcctacctggacaacgcggcgcgcatcgagcagcgcctgggcaagtacctgaacagcgag
gcagtgatgcccaagctgcacaaggtgctggccgatgccggaatcggttcgcgccgcgaa
atggaagagctgatcgtggccggccgggtgtcggtcaacggcgagccggcccacatcggc
cagcgcgtcgctcccaacgaccaggtgcgcgtcaacggcaagccgattgcgcgtcccaac
gccaagaagccgccgcgcgtcatcctctatcacaagccggccggcgagatcgtcagccat
gacgacccgggcggacgcgccagcgtgttcgccaggctgcccaagctgcgcaccggcaag
tggctgtccgtggggcggctggacctcaataccgaggggctgctgatcttcacgacctcc
ggcgacatggccaaccgcatcatgcatccgcgctacggtaccgagcgcgaatacgcggtg
cgcgtcctgggcgagatggacgacgcgcagcgcaagtcgctcaccgagggtatcgagctg
gaggacggcaaggcggctttcggttctttcgaatacctggggggcgacggcagcaatcgc
tggtatcgcgtcaccttgcaggaggggcgcaaccgcgaggtgcgccgcatgttcgaggcg
gtgggtgtgaccgtcagccgcctgatccgtacgcgtttcggcgatatcgtgttgccgcgc
aacctgcgccgcggccgctgggaagagctcgacggttcgctggtgacggccctgatggtt
cagctgggcctgctgcgcgacggggacgagtccgaagggcggcgcaaatcgcgccagccc
cagtcgcatgacagcgcgctgccgccgggcttcggcacgctggagcgcaatggcatgaac
ggcgcccgtatcggccgtcgcggcaagctgcagggcggccgtcccggcagcgcggccgcg
tgtccgtccgacccgttcggaacgggcttgatgatcaccggcggttatgccaacggccac
ccgctgggcaacgacagcgcggctgggcggggcggcaagggcaagcctgccaagggtaag
gcgggcggcgacaagccgcagcgcggccagggtcgcaaggcggcgggcgcgcgtggcggc
aagaaggcgggcggccgcgcggcggcgcctggcgccaagggcgcgggtggccgcgccggc
ggcaacaaggcagccagcgcgggcggcaaggcggccggcgtggccaagccggcctcgccc
acgggcaatcgcggtccggccgcgcccaagccgcaacgcgcgcgtcgcggcggcggtggt
ggtgccggcggtggtggcggtggccggggcgacgactggcagcccaagggcgccggcgcc
cacgagtcccgtctcgggttcatgggcgggcggggcgggcgcggacgttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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