KEGG   Bordetella pertussis CS: BPTD_0421
Entry
BPTD_0421         CDS       T01846                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bpc  Bordetella pertussis CS
Pathway
bpc03030  DNA replication
bpc03430  Mismatch repair
bpc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BPTD_0421 (dnaQ)
   03430 Mismatch repair
    BPTD_0421 (dnaQ)
   03440 Homologous recombination
    BPTD_0421 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpc03032]
    BPTD_0421 (dnaQ)
   03400 DNA repair and recombination proteins [BR:bpc03400]
    BPTD_0421 (dnaQ)
Enzymes [BR:bpc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BPTD_0421 (dnaQ)
DNA replication proteins [BR:bpc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BPTD_0421 (dnaQ)
DNA repair and recombination proteins [BR:bpc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BPTD_0421 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1 Rv2179c-like
Other DBs
NCBI-ProteinID: AEE65896
Position
complement(429359..430093)
AA seq 244 aa
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRMVTGNNLHLYLNPDRDSDPEALAVHGLT
TEFLADKPRFAEVAEQFLAFIADAELIAHNAAFDVKFFNAELQRIGRDPLNTHCENIVDS
LLHARSLHPGKRNSLDALCDRYGISNAHRTLHGALLDSQLLAEVWLAMTRGQDALLIDVD
DQGANANGALVLGKFDASVLTVLAASEAELAEHAAYLQALDKAVGGACAWRAIEPLPAES
GQPG
NT seq 735 nt   +upstreamnt  +downstreamnt
atgcgccagatcattttcgatacggaaaccaccggcctggacccggcccagggccatcgc
atcgtcgaaatcggttgcgtcgagatcgtcaaccggatggtcacgggcaacaatctgcac
ctctacctgaaccccgaccgcgacagcgaccccgaggcgctggcggtgcacggcctgacc
accgagttcctggccgacaagccgcgctttgccgaagtggccgagcaattcctggctttc
atcgccgacgccgagctgatcgcccacaacgccgcgttcgacgtcaagttcttcaacgcc
gagctgcagcgcatcggccgcgatccgctgaacacccactgcgagaacattgtcgattcg
ctgctgcatgcgcgcagcctgcaccccggcaagcgcaactcgctcgacgcgctgtgcgac
cgctacggcatctccaacgcccaccggaccctgcacggcgccttgctcgactcgcagctg
ctggccgaggtctggctggcgatgacgcgcggccaggacgccttgctgatcgacgtcgat
gaccagggcgcgaacgccaacggcgcgttggtgctgggcaagttcgatgcctcggtgctg
accgtgctggccgccagcgaagcggaattggccgagcatgcggcctatctgcaggcgctg
gacaaggcggtcggcggggcctgcgcctggcgcgcgatcgagccgctgcccgcggaatcc
gggcagcctggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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