KEGG T01846: BPTD

Bordetella pertussis CS: BPTD_0940

Entry

BPTD_0940         CDS       T01846

Symbol

gyrA

Name

(GenBank) DNA gyrase subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

bpc Bordetella pertussis CS

Brite

KEGG Orthology (KO) [BR:bpc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpc03032]
    BPTD_0940 (gyrA)
   03400 DNA repair and recombination proteins [BR:bpc03400]
    BPTD_0940 (gyrA)
Enzymes [BR:bpc01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BPTD_0940 (gyrA)
DNA replication proteins [BR:bpc03032]
Prokaryotic type
  DNA Topoisomerases
   BPTD_0940 (gyrA)
DNA repair and recombination proteins [BR:bpc03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BPTD_0940 (gyrA)

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C

Other DBs

NCBI-ProteinID:

AEE66364

Position

1004272..1006953

AA seq 893 aa
MDSFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDNAAAM
RYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNLLVNGSSGIAVGMAT
NIPPHNLQEVVDGCLYCLRNPECSIDELIELIPAPDFPTGGVIYGITGVREGYRTGRGRV
IMRAKTHFEDMEKGNRQAIVVDAIPYQVNKKTLQERIAELVNDKKIEGISDIRDESDKDG
MRLVIELKRGEVPEVVLNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQLIEYFLQHRRE
VVTRRTVFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMARSWDSSLV
REMLARVDGDAAGGVAAFRPDDLAPEYGLQGDGNYRLSETQAQEILNMRLQRLTGLEQDK
IIGEYKDVMATIADLLDILARPDRITTIISEELQAIKAEFSTSAKDTRRAEIEVNATELD
TEDLITPMDMVVTLSHGGYIKSQPLSEYRSQKRGGRGKQATAMKENDWVDQLFIANTHDY
LLCFSNRGRVYWLKVWEVPQGTRNSRGKPIVNMFPLADGEKVTVVLPVKEFSEDHYVFMA
TSRGTVKKTPLSDFSNPRKAGIIAVDLDDGDYLIGADLTDGKHDVMLFSDAGKAVRFDEN
DVRPMGRNARGVRGMMLEEGQTVIALLVAGDETQSVLTATENGYGKRTPITEYTRHGRGT
KGMIAIQTSSRNGRVVGAVLVMPSDEIMLITTGGVLVRTRVAEIREMGRATQGVTLISVD
DGSSLSGVRRVVESDADADDEDGGEEGGEEGGDQGGDDTGAQGKDSEPTEPTE

NT seq 2682 nt +upstreamnt +downstreamnt
atggattccttcgccaaggagacgcttccggtatcgctggaagaagagatgcgccgtagc
tatcttgattacgcgatgagcgtgatcgtggggcgcgcgctgccagacgtgcgtgacggt
ctcaagcctgtgcatcgccgcgtgctgtacgcgatgcacgaactgaacaacgattggaac
cgtgcctataagaagtccgcgcgtatcgtcggggacgtcatcggtaagtaccacccgcac
ggcgaccagtcggtatacgacaccatcgtccgcatggcgcaggacttctccatgcgctac
atgctggtcgacggccagggcaacttcggctccatcgacggcgacaacgccgcggcgatg
cgctacaccgaaatccgcctggccaagatcgcgcacgagttgctggccgatatcgaccag
gaaacggtcgacttcgggcccaactacgacggcagcgaacaggagcccctgctgctgcct
tcgcgcctgcccaacctgctggtcaacggcagctcgggtatcgccgtgggcatggccacc
aacattcccccgcacaacctgcaggaagtggtcgacggctgcctgtattgcctgcgcaat
ccggaatgctcgatcgacgagctgatcgaactgatcccggcgccggactttcccacgggc
ggggtgatctacggcatcacgggcgttcgcgaggggtaccgcaccgggcgcggccgcgtc
atcatgcgcgccaagacccacttcgaggacatggagaagggcaaccgccaggccatcgtg
gtcgacgcgattccctaccaggtcaacaagaagaccctgcaggagcgcatcgccgagctg
gtcaacgacaagaagatcgagggcatttcggacatccgcgacgagtcggacaaggacggc
atgcgcctggtcatcgagctcaagcgcggcgaagtgcccgaggtggtgctgaacaacctg
tacaagaatacgcagctgcaggacaccttcggcatgaacctggtggcgctggtcgacggc
cagccgcgcctgctgaacctcaagcagctgatcgagtacttcctgcagcatcgccgcgaa
gtggtgacgcgccgcaccgtgttccagctgcgcaaggcgcgcgaacgcggccacgtgctg
gaaggcctggcggtggcgctggccaacatcgacgacttcatcgccatcatcaaggcggcg
cccaccccgccggtggcgcgccaggaattgatggcgcgttcctgggattcgtcgctggtg
cgtgaaatgctggcccgcgtcgacggcgacgccgccggcggcgtcgcggcgttccgcccc
gacgacctggcgcccgagtacggcctgcagggcgatggcaactaccggctgagcgagacc
caggcgcaggaaatcctcaacatgcgcctgcaacgcctgaccggcctggagcaggacaag
atcatcggcgagtacaaggacgtgatggccaccatcgccgacctgctcgacatcctggcc
cgtccggatcgcatcaccacgatcatcagcgaagagctgcaggccatcaaggccgagttc
tcgacctcggccaaggatacgcgccgcgccgaaatcgaagtcaacgccaccgagctggat
accgaagacctgatcacgccgatggacatggtggtcaccctgtcgcatggcggatacatc
aagagccagccgctgtccgagtaccgttcgcaaaagcgcggcggacgcggcaagcaggct
accgccatgaaggagaacgactgggtcgaccagctgttcatcgccaatacgcacgactac
ctgctgtgcttctccaaccggggccgggtgtactggctgaaggtgtgggaggtgccgcag
ggcacgcgcaactcgcgcggcaagcccatcgtcaacatgttcccgctggccgacggcgag
aaggtgaccgtggtgctgccggtcaaggaattcagcgaagaccactacgtcttcatggcg
acgtcgcgcggcacggtcaagaagaccccgctgtccgacttctcgaacccgcgcaaggcc
ggcatcatcgccgtcgacctggatgacggcgattacctgatcggcgcagacctgaccgac
ggcaagcacgatgtgatgttgttctccgacgccggcaaggcggtgcgcttcgacgagaac
gacgtgcgtccgatgggccgcaatgcgcgcggcgtgcgcggcatgatgctcgaagagggc
cagaccgtcatcgcgctgctggtggccggcgacgagacccagagcgtgctgaccgccacc
gagaacggctacggcaagcgcaccccgatcaccgagtacacccgccatggccgcggcacc
aagggcatgatcgccatccagaccagctcgcgcaacggccgcgtggtcggcgccgtgctg
gtgatgccgtccgacgagatcatgctgatcaccaccggcggcgtgctggtgcgcacccgc
gtggccgagatccgcgagatgggtcgcgccacgcagggcgtcacgctgatcagcgtcgat
gacggcagcagcctgtccggcgtgcggcgcgtggtcgaaagcgatgccgacgccgatgac
gaggatggcggcgaagagggcggcgaagagggcggcgaccaaggcggcgacgataccggc
gcccagggcaaggattctgaaccgactgaacctacggagtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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