KEGG T00481: BURPS668

Burkholderia pseudomallei 668: BURPS668_2451

Entry

BURPS668_2451 CDS T00481

Gene name

dapE

Definition

succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)

Orthology

K01439

succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]

Organism

bpd Burkholderia pseudomallei 668

Pathway

bpd00300	Lysine biosynthesis
bpd01100	Metabolic pathways
bpd01120	Microbial metabolism in diverse environments
bpd01230	Biosynthesis of amino acids

Module

bpd_M00016

Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:bpd00300]

SSDB

Motif

Pfam:

Peptidase_M20 M20_dimer

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

JCVI-Pathema:

UniProt:

Position

I:2418988..2420127

AA seq 379 aa
MSATLALTEQLIARASVTPDDQHCQQLMIERLAALGFECETIASHGVTNFWAVKRGTAGR
AGKLLAFAGHTDVVPTGPLEQWSSPPFVPTHRDGKLYGRGAADMKTSLAGFVVAAEEFVA
AHPQHRGSIGFLITSDEEGPATDGTVKVVEALAARGERLDYCIVGEPTSTATLGDVVKNG
RRGSMSGELVVKGVQGHIAYPHLAKNPIHLLAPALAELAAEQWDEGNEYFPPTTWQVSNL
RAGTGATNVIPGHADLLFNFRFSTASTVEGLQARVHAILDRHGLDYTLNWSVSGLPFLTP
RGELSNALDAAIRAETGVSPELSTTGGTSDGRFIARICPQVIEFGPPNASIHKIDEHIDV
RFVDPLKNVYRRVLEQLIA

NT seq 1140 nt +upstreamnt +downstreamnt
atgtccgccacccttgccctcaccgaacagctgatcgcgcgcgcgtccgtcacgcccgac
gatcagcactgccagcaattgatgatcgagcgcctcgccgccctcggcttcgagtgcgaa
acgatcgcgtcgcacggcgtgacgaacttctgggccgtcaagcgcggcacggccggccgc
gcaggcaagctgctcgcgttcgcgggccataccgacgtcgtgccgaccggcccgctcgag
cagtggagctcgccgccgttcgtgccgacgcaccgcgacggcaagctgtacggccgcggc
gcggccgacatgaaaacctcgctcgcgggcttcgtcgtcgcggccgaggagttcgtcgcc
gcgcatccgcagcaccgcggctcgatcggtttcctgatcacgagcgacgaggaaggcccg
gccaccgacggcaccgtgaaagtcgtcgaggcgctcgccgcgcgcggcgagcgcctcgat
tactgcatcgtcggcgaaccgacctcgacggcgacgctcggcgacgtcgtgaagaacggc
cggcgcggctcgatgtcgggcgagctcgtcgtcaagggcgtgcaaggccatatcgcgtat
ccgcatctcgcgaagaacccgatccatctgctcgcgccggcgctcgccgagctcgccgcc
gagcaatgggacgaaggcaacgagtactttccgccgaccacctggcaggtgtcgaacctg
cgcgcgggcaccggcgcgacgaacgtgattccgggccacgccgatctgctgttcaacttc
cgcttctcgacggcgagcacggtcgagggcctgcaggcgcgcgtgcacgcgatcctcgac
aggcacgggctcgattacacgctgaactggtcggtgagcggcctgccgttcctcacgccg
cgcggcgagctgtcgaacgcgctcgacgccgcgatccgcgcggaaacgggcgtctcgccc
gagctgtcgacgacgggcggcacgtccgacggccgcttcatcgcgcgcatctgcccgcag
gtgatcgagttcggcccgccaaacgcgagcatccacaagatcgacgagcacatcgacgtg
cgcttcgtcgacccgctgaagaacgtgtaccgccgcgtgctcgaacaactgatcgcctga

All links

Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   JCVI-PATHEMA-BPD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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