KEGG   Bordetella pertussis Tohama I: BP0239
Entry
BP0239            CDS       T00139                                 
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
bpe  Bordetella pertussis Tohama I
Pathway
bpe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BP0239 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpe03019]
    BP0239 (pcnB)
Enzymes [BR:bpe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     BP0239 (pcnB)
Messenger RNA biogenesis [BR:bpe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     BP0239 (pcnB)
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: CAE40619
UniProt: Q7W0B0
Position
complement(246684..248039)
AA seq 451 aa
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGA
VRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPAS
DDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYHQGVQDLKKRQVRI
IGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLL
TCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFL
FAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQP
RFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEE
TAHLPRETGDAPAQKRRRPRRRPSNRPREPQ
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgattaccgaaaccataagaaaatttgtcggccggctgttcgcgccggccctgcgcggc
ccacagcgcatcggcgcggaacgccatggcatcgatcgccgcaatgtctcgcgccacgcc
atcaaagtctgcgacgtcctgcgccagcatggctacgaagcctatatcgtcggcggcgcg
gtgcgcgacctgatcgtgggcctggagcccaaggatttcgacgtggccaccaatgccacg
cccgagcagatccggccgctgtttcgccgcgcccgcatcatcggccggcgcttccagctg
gtgcacgtggtgttcggccaggaaatcatcgaaacctcgaccttccgcgcgccggcctcg
gacgaccaggaaaccgacgagcacggccgcatcctgcgcgacaacgtattcggcagccag
gaagaagacgcggcgcgccgcgacttcaccatgaacgcgctgtactacgacccgcacacc
gaggaagtcatcgactaccaccagggcgtgcaggacctgaaaaagcgccaggtgcgcatc
atcggcgatccggtcaagcgctatcgcgaagaccccgtgcgcatgctgcgggcggtgcgc
ttcgccgccaagctgaacggcagcatcgataccgccacgcggcagccgatccgcaccatg
gccagcctgatcgagaacgtgccggcctcgcgcctgttcgacgaaatgctcaagctgctg
acctgcggccacgccatggactgcctgcggcagttgcgcaacgacggcctgcaccacggc
ctgctgcccttgctcgacgtcgtgctcgagcagcccggcggcgagaatttcgtcgaactg
gcgctggagcgcaccgatgcgcgcgtgcgcgccggcaagaccatcagccccagcttcctg
ttcgcggcgctgctgtggcaactggtcgacgtgcgctggaaacagctgcgggcccagggc
gagcacaacatccccgcgctggtgcaggccgccgactcggtgctggacgaacagaccgag
aaactggccatccagcgccgcttctcgtccgatatgcgcgagatctggttcatgcagccg
cgcttcgagcgccgcgccggcaagaccatctaccgcatgctggagcagccgcgctttcgc
gccgcctgcgacttcctgcagctgcgcgccgccgccggcgagttcgacagcgtgctggcc
cagtggtggatggacctggccaatggcgacgatgccacgcgcgccgaaatgatcgaggaa
accgcccacctgccgcgcgaaacgggcgacgcgccggcgcaaaagcgccgccgtccgcgc
cgccgcccgtccaaccgcccgcgcgaaccgcaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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