KEGG   Bordetella pertussis Tohama I: BP0709
Entry
BP0709            CDS       T00139                                 
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
bpe  Bordetella pertussis Tohama I
Pathway
bpe00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:bpe00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    BP0709 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:bpe01007]
    BP0709 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bpe03016]
    BP0709 (aspS)
   03029 Mitochondrial biogenesis [BR:bpe03029]
    BP0709 (aspS)
Enzymes [BR:bpe01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     BP0709 (aspS)
Amino acid related enzymes [BR:bpe01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   BP0709 (aspS)
Transfer RNA biogenesis [BR:bpe03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    BP0709 (aspS)
 Prokaryotic type
   Other AARSs
    BP0709 (aspS)
Mitochondrial biogenesis [BR:bpe03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    BP0709 (aspS)
SSDB
Motif
Pfam: tRNA-synt_2 GAD tRNA_anti-codon tRNA-synt_2b tRNA-synt_2d
Other DBs
NCBI-ProteinID: CAE41019
UniProt: Q7W001
Position
723420..725210
AA seq 596 aa
MRTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRTGLAQIVFDPDNAEAFGTA
ERLRNEFCISITGLVRLRPEGTANAELASGEVEVLCQQVEILNASVTPPFQLDDDNLSET
TRLTHRVLDLRRPQMQHNLMLRYRVSIEVRKYLDQLGFIDIETPMLTKSTPEGARDYLVP
SRVNAGYFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFL
NEVEIREIFEGMIRHVFKVVQDVDLPTPFPIMSWTEAMQRYGSDKPDLRVNLEFTDMTDV
MRDVDFKVFASAATTAGSRVVALRVQGGGEMSRSEIDAYTQFVGIYGAKGLAYIKVNDVA
KGREGLQSPIVKNLHDAALAELVKRTGAQNGDIIFFGADRAKVVNDAIGALRVKIGHSEF
GKKAGLFSGGWKPLWVVDFPMFEYDEEENRYTAAHHPFTSPKDGHEDFLESDPGKAVAKA
YDMVLNGWEIGGGSVRIHREEVQSKVFRALKIDAEEAREKFGFLLDALQYGAPPHGGIAF
GLDRIITMMAGAESIRDVIAFPKTQRAQCLLTGAPSEVDEKQLRELHIRLRNVEVK
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgcgtacctgctacaccggccaggtttgccgtgaccatctcggccagactgtcaccctg
tacggctgggtgaaccgccgccgcgaccacggcggggtcatcttcatcgacctgcgcgat
cgcacgggcctggcgcaaatcgtgttcgaccccgacaatgccgaggctttcggcacggcc
gagcgcctgcgcaacgagttctgcatcagcatcaccggcctggtgcgcctgcgccccgaa
ggcacggccaacgccgagctggcctcgggcgaggtcgaagtgctgtgccagcaggtcgag
atcctcaacgcgtcggtgacgccgccgttccagctggatgacgacaacctgtcggaaacc
acccggctgacccatcgcgtgctggacctgcgccgcccgcagatgcagcacaacctgatg
ctgcgctaccgcgtctcgatcgaagtgcgcaagtacctcgaccagctcggcttcatcgac
atcgaaacgccgatgctgaccaagagcacgcccgagggcgcgcgcgactacctggtgccg
tcgcgggtcaacgccgggtatttctttgccctgccgcaatcgccgcagctgttcaagcag
atgctgatggtctcgggtttcgaccgttactaccagatcaccaagtgcttccgcgacgaa
gacctgcgcgccgaccgccagcccgaattcacccagatcgattgcgagacttcgttcctg
aacgaagtcgagatccgtgaaatcttcgaaggcatgatccgccatgtattcaaggtggtg
caggacgtggacctgcccacgccgttccccatcatgagctggacggaggccatgcagcgc
tatggctcggacaagcccgacctgcgcgtcaacctggaattcaccgacatgaccgacgtc
atgcgcgacgtggatttcaaggtgttcgcctcggccgccaccaccgcgggcagccgcgtc
gtggcgctgcgcgtgcagggcggcggcgagatgtcgcgcagcgagatcgacgcctacacg
caattcgtcggcatctacggcgccaagggcctggcctacatcaaggtcaacgacgtggcc
aagggccgcgagggcctgcagtcgcccatcgtcaagaacctgcacgatgccgcgctggcc
gaactggtcaagcgcaccggcgcgcagaacggcgacatcatcttcttcggcgcggatcgc
gccaaggtggtcaacgacgccatcggcgcgctgcgcgtgaagatcggccacagcgaattc
ggcaagaaggccggcctgttcagcggcggctggaagccgctgtgggtcgtcgacttcccc
atgttcgagtacgacgaggaggaaaaccgctataccgccgcgcaccacccgttcaccagc
ccgaaggacggccacgaggacttcctcgaaagcgatccgggcaaggccgtcgccaaggcc
tacgacatggtgctcaacggctgggaaatcggcggcggctcggtgcgtatccaccgcgag
gaagtgcagagcaaggtattccgcgcgctcaagatcgacgccgaggaggcgcgcgagaag
ttcggcttcctgctggacgcgctgcagtatggcgcgccgccgcatggcggcatcgcgttc
ggcctggaccgcatcatcaccatgatggccggcgccgaatccatccgcgacgtgatcgcc
ttccccaagacccagcgtgcgcagtgcctgttgaccggcgcgccgtcggaagtcgacgag
aagcaattgcgcgagctgcacatccgcttgcgcaacgtcgaagtgaaatga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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