KEGG   Bordetella pertussis Tohama I: BP3129Help
Entry
BP3129            CDS       T00139                                 

Gene name
mutM
Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bpe  Bordetella pertussis Tohama I
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:bpe00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    BP3129 (mutM)
Enzymes [BR:bpe01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     BP3129 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BP3129 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
GeneDB: 
UniProt: 
Position
3334024..3334851
Genome map
AA seq 275 aa AA seqDB search
MPELPEVETTRRGIDTVITGRTLRRLVVREARMRWPIPPALPDLLAGRTVLECGRRGKYL
LLRFDHGVQIVHLGMSGSLRRVPEQEAPRKHDHVDWVFDHAVLRLHDPRRFGAVLWHPDE
AGPIAAHPLLARLGIEPFDPRFDGRWLHAYFRGRRVAIKQALLAGDAVVGVGNIYASESL
FRAGIDPRTAAQRVSAARCDRLAAAIRATLSDALDSGGSTLRDYVGASGEPGAYFAIHAA
VYERAGLPCRVCGTPIRRLVQGQRATYFCPSCQKR
NT seq 828 nt NT seq  +upstreamnt  +downstreamnt
atgccggaactgcctgaagtcgagaccacccgacggggaatcgacaccgtcataacgggc
cggacgctacgccgcctggtcgtgcgcgaagcgcgcatgcgctggcccattccacccgcc
ctgcccgatctgctggccggccgcaccgtgctcgaatgcgggcggcgcggcaaatacctg
ctgctgcgcttcgaccatggcgtgcagatcgtgcacctgggcatgtccggatcgctgcgc
cgggtgcccgagcaggaggcgccgcgcaagcacgaccacgtcgactgggttttcgaccac
gccgtcctgcggctgcacgatccgcgccgcttcggcgcggtgctgtggcaccccgacgag
gccggcccgatcgccgcccacccgctgctggcccgcctgggcatcgaaccgttcgacccg
cgctttgacggccgctggctgcacgcctacttccgcggacgccgggtcgccatcaagcag
gccctgctggccggcgacgccgtggtgggcgtgggcaacatctacgcatcggaaagcctg
tttcgcgccggcatcgatccgcgcacggccgcccagcgcgtctcggcggcgcgctgcgac
cggctggcggccgccatccgcgccaccctgtcggacgcgctggattccggcggcagcacg
ctgcgcgactacgtcggcgccagcggcgagccgggcgcgtatttcgccatccacgccgcc
gtctacgagcgcgccggcctgccctgccgcgtgtgcggcacgccgatccgccgcctggtg
cagggccagcgcgccacgtatttctgtccgagctgccagaaacgctag

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