KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110155425
Entry
110155425         CDS       T05002                                 
Symbol
tdrd9
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD9
  KO
K18408  ATP-dependent RNA helicase TDRD9 [EC:5.6.2.5]
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bpec03036]
    110155425 (tdrd9)
Enzymes [BR:bpec01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.5  RNA 5'-3' helicase
     110155425 (tdrd9)
Chromosome and associated proteins [BR:bpec03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    110155425 (tdrd9)
SSDB
Motif
Pfam: DEAD TUDOR Helicase_C nSTAND3 AAA_19 AAA_22 ResIII HMMR_C AAA_14 T2SSE PhoH HA2_N HA2_C ATPase AAA_7 DUF641
Other DBs
NCBI-GeneID: 110155425
NCBI-ProteinID: XP_020775184
Position
Unknown
AA seq 1668 aa
MKKVITAEQISEWFTSETTFANIKLTDEVTGGKLQAKENCEKQSKTPETAPRDCPTDGDK
ETTATSQKEVQSSPRKEPQKISRPPTLTSYEYPSLPVTKNRQKLISLIENSSVLIIQGAT
GSGKTTQVPQYILDHYNEKNTPCNIVVTQPRKIGATSIARWVASQRKCTLGSLVGYQILL
AELNAERTAKNEEIQRLKTQLTEKEMVRLEIQALVDQFYSKQTQNMDPNGVELSEAINKS
ILQELQDEKADKNTILQKLSDMQKKMQAQESLLAQSQTCVQELTSELRNRCLELRELSQR
VHDEEKLLQENEVLRKQNIQLSEENGKLVGHKNHKQRIEYLVKLKKDNTKLQEENEKLSE
KQSKTPETAPRDCPTDGDKETTATSQKEVQSSPRKEPQKISRPPTLTSYEYPSLPVTKNR
QKLISLIENSSVLIIQGATGSGKTTQVPQYILDHYNEKNTPCNIVVTQPRKIGATSIARW
VASQRKCTLGSLVGYQVGLEKMATEHTRLIYMTTGVLLQKLVRAKCLTEYTHIFVDEVHE
RTEEMDFLLLVLRKLLHSNSRYVKIILMSATINCKQFAEYFGTPVRGKMNPACVFEVEGA
PYAIDEFYLEDLYRLFPYRVCVGLSLITDPFISVEMYNIAISLIQSFDEVEGKDCSQVDS
RGTSTERGSVLVFLPGFYEICYMQEALSKFVHKRLQVYPLHSTVTLEEQNGVFLSPVPGY
RKVILSTNIAESSVTVPDVKYVIDFCLARHLVCDPETNYQSLQLTWASKTNCNQRKGRAG
RVSKGFCYRLVTREFWKNEIPDYMTPEILVAPLATILLKVKLLDMGDPRSVLSTALLPPN
HDNIVRTVLQLKEMGALSTTSETCCQNEDGELTFLGRVLAHLPVDLYLGKLIVLGHVFGC
LEECLIIAASHSMKSFFAIPSMQQLAGHRSKLTFARGTLSDSIAFVNAFKAWYTAKKKGQ
LRHPKDELDWGKENFIQIKRIREVAELFEDLKQRVSQFNMHIPESSQSLDYTSTHQQRFI
LQVVIAGAYYPNYFVQGEIDEDLASRELSGFSPKTTVMIRNLPPYSFLYYKQLQSLFRLC
GLVKAISFDNSRAYVEFTRHPQDSGVLPDVSLALLLCQQSSPLELSVYPLDQIEMCAGQR
NITHLKYGRVSVDFQTQSVSPVGLISGEMDPDKLPSNYMFVVSITEVVEVGHFWGFRTDE
ESLEKQRRMTSEINRRPLQPVSMSLYSNLICLAPYSEVNDQSTESTYYRAKILHIRGNTT
EVFFLDFGNTSMVPCRSLRELPPDLLSEPFQAQEFQIMGMRPSAQSMIQGNPWSSRSWDR
FVTLVKGHSLIVSLYSILHGVMRVELLLSTDTLQSSIRDILVQEGHAEKAEESFESKLNH
EVMMSVYKDMEDGTYVGNSMSTSWQERKQEDQETINSLLEHFSKAHLNFSKTKVHLHGPY
SPNKIFYSSLNHKTLYKRVTIERNSMNSLAINENPHYKHQRMLVAGAVSVNSTGTLILLR
ETTLMPDIPGLPALITMLFTPIMELRTNEERTAYTGALCGLGWDNDTQDGILPERDIELA
FDVKFDVEDITEINALRLAINHLVCEGPSGTLHLSPDRTAQLQDDCREQLIRLFSKYPGR
EQTPPVHYSLKEKWNQVDPSLKMDIVQPGSKKSRGVLFQLHPVTLLNT
NT seq 5007 nt   +upstreamnt  +downstreamnt
atgaagaaggttattacagcagagcagatatcggagtggttcacgtctgaaaccacattt
gccaatatcaaacttacagatgaagttactggaggaaaactgcaagcaaaagaaaactgt
gagaagcagtccaagaccccagagacagcccccagagattgtcctacagatggtgataaa
gagactacagcaacctcacaaaaagaggtgcaaagttcccccagaaaagagccccagaaa
attagcaggccacctacattgaccagctatgagtaccccagcctgcctgtcaccaaaaac
agacagaagcttatatccctcatagaaaacagttctgtgctgatcattcaaggggccaca
ggtagcggtaaaaccacccaggtgccacagtacattttggaccactacaacgagaagaat
accccatgcaacattgtagtcactcagcctcggaaaattggggccacaagcattgcccga
tgggtggcttcacagaggaagtgcaccttaggcagtctagttggatatcagatcctgttg
gcagagttgaatgctgagaggactgccaagaatgaagagatccagaggctcaagactcaa
ctaactgaaaaagaaatggtacgactggagattcaggcgttggtggatcagttttattcc
aagcaaacacaaaacatggatcctaatggtgtggagttgagtgaagctattaacaagtct
atcttacaagaactacaagatgagaaagcagataagaacactattctgcagaagttgtca
gacatgcagaaaaaaatgcaggctcaggagtctctgctggcccagtcccagacctgtgtc
caagagctcacctctgagctgagaaaccgctgtttggagctgagggagctgagccagagg
gtgcacgacgaggagaagcttctccaggagaatgaggttctacgtaagcagaatatccaa
ctatcagaagaaaatggaaaacttgttgggcacaaaaatcacaaacagagaatagagtat
ttggtgaagttaaaaaaggacaacaccaagcttcaagaggaaaatgaaaagctgagtgag
aagcagtccaagaccccagagacagcccccagagattgtcctacagatggtgataaagag
actacagcaacctcacaaaaagaggtgcaaagttcccccagaaaagagccccagaaaatt
agcaggccacctacattgaccagctatgagtaccccagcctgcctgtcaccaaaaacaga
cagaagcttatatccctcatagaaaacagttctgtgctgatcattcaaggggccacaggt
agcggtaaaaccacccaggtgccacagtacattttggaccactacaacgagaagaatacc
ccatgcaacattgtagtcactcagcctcggaaaattggggccacaagcattgcccgatgg
gtggcttcacagaggaagtgcaccttaggcagtctagttggatatcaggtgggactagag
aagatggccacagagcacactcgtctgatctacatgaccactggagtgctgctccaaaag
ctggttagagcaaagtgtctgactgagtacacccacatctttgtggacgaggttcacgag
cgcactgaggaaatggactttctccttctggttttgagaaaactcctccactcaaactct
cgttatgtaaagatcatcctcatgtctgccactatcaactgcaaacagtttgctgaatac
tttggcaccccagtccgtggcaaaatgaaccccgcctgtgtgtttgaagtggagggtgct
ccatatgctattgatgagttttatttggaagacctctaccgcctgtttccttatagagta
tgtgttggcctctctctcatcactgatcctttcatttctgtggagatgtacaacatcgct
atcagtctcattcagagttttgatgaagtggagggtaaagattgcagtcaagtggattcc
agaggaacctctacagagcgaggcagcgtgctggtttttctccctggattttatgagata
tgttacatgcaggaggccttgtcaaagtttgtccataaaaggcttcaggtgtatccactc
cactccactgtgaccctggaggaacagaatggggtgtttttgtcccctgtacctggatac
aggaaggtcatcctgtctacaaatatcgcagagagttcagtcacagttccagatgtcaaa
tatgttattgacttctgcctggcacgtcacctggtttgtgatccagaaactaattatcag
tccttgcaactaacttgggcctccaaaaccaactgtaatcagagaaaaggcagagctggc
cgagtgtcaaaaggattctgctatcgcctggtgacccgcgagttctggaaaaatgagatt
cctgattacatgactccagagatattggttgcccccttggccactatattgttgaaggtg
aagctcctggacatgggtgatccccgctcagttctgtccacagctctcttgcccccaaac
cacgacaacatcgtgaggactgtactgcagcttaaggagatgggagcactgtcaaccacc
agtgagacgtgctgtcagaatgaagatggggagctgacctttttgggccgagtactggct
cacctacctgtggacctgtacctgggaaaactgatcgtcctgggacatgtctttggatgt
ctggaagaatgtctcatcatcgctgcctcacattctatgaaaagcttttttgccataccg
tccatgcaacaactcgctggccacaggagcaagttgacttttgcacgtggcacattaagt
gattccattgcatttgttaacgccttcaaggcctggtatacagccaaaaagaaaggacaa
ctcagacacccaaaggatgaattggactggggaaaggagaacttcatacaaatcaaaaga
atcagagaggtggcagagctgtttgaagatctaaagcaacgtgtgtcacagttcaacatg
cacatccctgagagcagccagtccctggactacaccagcacacaccagcagaggttcatt
ctacaggtggtcattgctggagcatactaccccaactactttgttcagggggaaattgat
gaagaccttgcttcaagagagctgagtggctttagccccaaaacaactgtaatgataagg
aatcttccaccatacagttttctctactacaagcagctgcagtccctctttcgcctgtgt
ggcctagtcaaagccatttcctttgacaactccagggcgtatgtagagttcaccaggcat
ccccaggactccggagtgctgcctgacgtgtccctggcgctcctcctgtgccagcagagt
tctccccttgagctgtcggtataccctcttgaccagatcgaaatgtgtgctgggcaaagg
aatatcactcacctcaaatatggacgggtcagtgtggacttccagactcaaagcgtgtcc
ccagtggggctcataagtggtgaaatggaccctgataaacttccttcaaactacatgttt
gttgtcagcatcactgaggtggtggaggtgggtcacttctgggggttccgtacagatgaa
gagagcctggagaagcagcgtcgcatgacttcagagataaaccgccgtcctctccagcca
gtttccatgtctctctactccaaccttatttgcctggctccgtactctgaggtcaacgac
cagagtacagagtctacatattaccgtgccaagatcttgcacatccgtggaaacactaca
gaggtgttcttcctagactttggaaacacatcgatggttccttgcagaagtctcagggag
ttgccccctgaccttctgtctgaaccatttcaggcccaagagtttcagatcatgggaatg
cgcccctcagcccagtccatgattcaaggcaatccatggagcagcagatcctgggatcgc
tttgtcactttggtgaagggccattccttaattgtgtcactctactccatcctccatgga
gtgatgagagttgagctgctcctcagcacggacaccttacagtccagtatcagagacatt
ctggtgcaggaaggacatgctgagaaggctgaagagagctttgagtccaagctaaatcac
gaggtgatgatgtctgtgtataaagacatggaggatggaacttatgtgggcaactccatg
agtacatcatggcaagagcgcaaacaagaggatcaggaaacgattaacagtctcctggaa
cacttcagcaaagcccatctgaatttctcgaagacaaaggtacatttgcatggaccatat
agccccaataagatcttttacagcagcctaaaccacaagactttgtacaagagggttact
attgagaggaacagcatgaactccttggctataaatgaaaatcctcactacaaacaccag
aggatgctggttgctggagcagtgtctgtcaactccactggtactcttattcttctgaga
gaaaccactttgatgccagacatccctggtctgcctgccctcatcactatgctcttcact
cccatcatggagcttcggaccaacgaggagcgcactgcatacactggggctctgtgtggc
ctgggatgggacaatgacacacaggacggcatcctcccagaacgtgacatcgagttggcc
tttgatgtcaagtttgatgtggaagatatcacagaaatcaatgctctccggctggcaata
aatcacctggtgtgtgaggggccgagtgggacacttcacctaagccctgaccggacagct
cagctccaagatgactgcagggagcaactgatcagactattcagtaaatacccaggacga
gagcaaacccctccagtgcattacagcctgaaggaaaaatggaatcaggtggatccatct
ctcaaaatggatatagtccaaccagggtctaaaaaatccagaggagtcttgttccagctt
catcctgttacactgttgaacacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (16)   
   Pfam (16)   
All databases (64)   

Download RDF
DBGET integrated database retrieval system