KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110156355
Entry
110156355         CDS       T05002                                 
Symbol
thoc3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013  Nucleocytoplasmic transport
bpec03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110156355 (thoc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    110156355 (thoc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpec03019]
    110156355 (thoc3)
   03041 Spliceosome [BR:bpec03041]
    110156355 (thoc3)
Messenger RNA biogenesis [BR:bpec03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110156355 (thoc3)
Spliceosome [BR:bpec03041]
 Complex C
  Other components
   EJC/TREX
    110156355 (thoc3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110156355 (thoc3)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A RMC1_N NBCH_WD40 PD40 Coatomer_WDAD Cytochrom_D1 Peptidase_S9_N Nup160 DPPIV_N YNCE Me-amine-dh_H CNH IKI3 DUF359 WDCP
Other DBs
NCBI-GeneID: 110156355
NCBI-ProteinID: XP_020776222
Position
Unknown
AA seq 322 aa
MASQYFQTMQESFKNNNKSREFQAHSAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL
VKENNYRGHGDSVDQLCWHPTNPDLFVTASGDKTVRIWDVRTTKCIATVNTKGENINICW
SPDGQTIAVGNKDDVVTFIDAKTQRSKAEEQFKFEVNEISWNNDNDMFFLTNGNGCINIL
SYPELKPIQSINAHPSNCICIKFDPTGRYFAIGSADALVSLWDVDELVCVRCLSRLDWPA
RTLSFSHDGKMLASASEDHFIDIADVETGERLWEIQCDSPTFTVAWHPKRPLLAYACDDK
DGKYDNNREAGTVKLFGLPNDS
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcgtcgcagtattttcagacgatgcaggaaagcttcaaaaataacaataaaagtcgt
gaatttcaggcccattctgccaaagtgcactctgtggcgtggagctgtgacgggaggaga
ctggcctcaggctccttcgataaaaccgcttctgtttttgtcctggaaaaggatcgattg
gtgaaagagaataattaccgtgggcatggagacagcgtggatcagctctgttggcatccc
acaaatccagatctgttcgtcacagcgtcaggcgacaaaactgtgagaatctgggacgtc
cgcaccacaaaatgcatcgccacagtcaacactaaaggagagaatataaatatttgctgg
agccctgacggtcagacaatcgccgtgggaaacaaagacgatgttgtgacttttatcgat
gccaaaactcagcgctccaaagcagaagagcagtttaagttcgaggtgaacgagatttcg
tggaacaatgacaatgacatgtttttcctcaccaacggcaacggctgcatcaatatcctc
agttatccggagctgaagccgattcagtccataaacgctcacccctcaaactgcatctgt
ataaagtttgacccgactggacgatacttcgccatcggcagcgcagacgctctggtcagt
ctgtgggacgtggatgaactcgtctgtgtgcgctgcttatccagactagactggcctgcg
aggactctcagtttcagtcatgatggaaagatgttggcctccgcttcagaggatcatttc
atcgacatcgcagacgtggaaacaggagagcggttatgggagattcagtgtgactctcct
accttcactgtggcctggcacccgaagcgcccccttctggcttatgcctgcgatgacaag
gacggaaaatacgacaacaaccgcgaggccgggaccgtcaaattgttcgggctgcccaac
gactcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (47)   

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