KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110163624
Entry
110163624         CDS       T05002                                 
Symbol
ddx41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    110163624 (ddx41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bpec03041]
    110163624 (ddx41)
Enzymes [BR:bpec01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     110163624 (ddx41)
Spliceosome [BR:bpec03041]
 Complex C
  Other components
   Complex C specific factors
    110163624 (ddx41)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII zf-CCHC UTP25 SecA_DEAD AAA_22 Toprim
Other DBs
NCBI-GeneID: 110163624
NCBI-ProteinID: XP_020784282
Position
Unknown
AA seq 613 aa
MEAETRLQKRPIGEEERGSDGSEDDDYVPYVPVKIRKQQMLQKLQRIRGKVVDEEQKESG
EEQRDEEEGLGPRSNVSLLDQHQVLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSV
KEMAKGIIYDDPIKTSWTAPRYILNMPETRHERVRRKFHILVDGDGIPPPIKSFREMKFP
PAILKGLKKKGIIHPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFTLPIIMFALEQEKR
LPFFKREGPYGLIICPSRELARQTHGIIEYYCKLLEEEGAPPMRTALCIGGMSVKEQMEV
IKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYFKGQR
QTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQ
KTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVAT
DVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFINKGCDESVLMDLK
ALLVEAKQKVPPVLQVLQMGDETMLDIGGERGCTFCGGLGHRITDCPKLEAMQTKQVTNI
GRKDYLAHSSMDF
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggaggcagagactcgtcttcaaaagcggcccattggagaagaggagaggggctctgac
ggatcagaggatgatgactacgtcccatatgtccctgtcaaaatccgaaaacaacaaatg
ctccaaaaattgcagcgtattagagggaaggtagtggatgaggagcagaaagaaagtggc
gaggaacaaagagatgaagaagagggacttggtccacgctccaatgtcagtcttttggac
cagcaccaagtccttaaggaaaaggctgaagctcgtaaggagtctgccaaagaaaaacaa
ctcaaagaggaggaaaagattctggaaagtgttgcagagggcagagctttaatgtctgtg
aaagaaatggccaaaggtatcatatatgatgaccctattaaaaccagctggactgctccc
cgttatatcttgaacatgccagaaacaagacatgagcgagttagaagaaaatttcacatt
ctagttgatggtgatggcattccacctccaatcaaaagtttcagggaaatgaaatttcca
ccagcaatacttaaaggcttgaaaaagaaaggcattatacatccaacccccattcagata
caaggaattcccactgttctttctggacgggatatgattggcattgcttttaccggttct
ggaaagacattggtcttcactctgccgattatcatgtttgccttggagcaggaaaaacga
ctacctttctttaaacgtgaaggaccttatggccttatcatctgtccatcaagggagttg
gcaagacaaacacatggcattattgaatattactgcaaactgttagaagaagaaggcgct
ccaccaatgcgcactgccctctgtattggcggcatgtctgttaaggaacagatggaagta
ataaaacatggtgtccatatgatggtggcaactcctggtagactcatggacttactgcag
aagaagatggtcagtttggatatatgccgctacctggctctggatgaggctgataggatg
attgacatgggcttcgaggaggacattcgaaccattttctcctatttcaagggacaaagg
caaaccctcctttttagtgctactatgccaaagaagatacaaaacttcgccaagagtgca
cttgtcaaaccaataactattaatgtgggccgggcaggtgccgccagcttggatgtcatt
caggaagtggaatatgtcaaagaggaggccaagatggtgtacttactggagtgtctacag
aaaacgccaccacctgttttgatatttgctgagaaaaaggctgatgttgatgctattcat
gagtatcttttgctgaaaggtgtagaggctgtggccattcatggaggcaaagaccaagag
gaaagaacaaaagccatagaagcatttaaagaagggaaaaaagacgtgttggttgctaca
gatgttgcctccaagggtttggatttccctgctatacaacatgtagtaaactatgacatg
cccgaggagattgaaaactatgttcatagaattggaagaacgggtcgctcaggaaaaact
ggtattgctacaacgttcatcaataaaggctgtgatgagtctgtgctgatggacctgaaa
gcgctgctggttgaagccaaacagaaggttcctccagtccttcaggtgctacagatgggt
gacgagactatgttggacattggaggcgaaagaggctgtacattctgtggtggtctgggc
catcgtatcactgactgtcccaaactggaggctatgcagaccaagcaggtcaccaacatt
ggccgcaaggactacttggcccacagctcaatggacttttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (32)   

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