KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110164290
Entry
110164290         CDS       T05002                                 
Name
(RefSeq) collagen alpha-1(I) chain-like
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110164290
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:bpec00536]
    110164290
Glycosaminoglycan binding proteins [BR:bpec00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   110164290
SSDB
Motif
Pfam: Collagen Laminin_G_2 Laminin_G_3 COLFI Laminin_G_1 Pentapeptide
Other DBs
NCBI-GeneID: 110164290
NCBI-ProteinID: XP_020784985
Position
Unknown
AA seq 1642 aa
MSGCCWPPWTLCLLPLLLRNTCSAEAPDRADPDRAARSALDRAALDRAVLDGAVLDRAVL
DGAVLDRAGVDRAALGDSGGESGSGMLLPDELNVLQELWPHVSNRTNSSVRLERGGCPIL
QLGQYSTLTLALRHVLYDRFADDFSLLVHFRSRQKEERSVCSILSPEGHVTLQLRVSSTA
ITFIGSQDRHYEFPCAGLSDGKWHRVALSVSSKRLAVFVDCALLETVEWVHFGLGIGLDG
LLMVGGTTGTYDTPFEGELRQLSFVLGEPDVARSQCSRPQSHCDGTFLKPGRAPRTHSNN
NRLENLLLSSNDLENLLGSPEESSFLGLSQTHLYKRHLSTESVNQSDSKPFNMGKTKELS
KDVRDKTVDLHKAGMGYKIISKKLVLRRQLLGLFPRPGASRGDGTVPSGPERKGTITRGD
VFVVDEDTDLMDPFFIHPNWKPPRNSQKSHQKGKPDVSKDLEENITTDKKTDAGGRTIPI
YPGKPSDDIIDLDAGVAPKKPSVTPKSSVKAEELKPTSSHSGPSREPVKQEQPRVISAVS
REGDLVLGSDGKWYRLQRGPKGRMGPPGPEGCPGDVGLTGFKGDKGKTGPEGRPGRRGEP
GPPGPAGLPTLYLWRNTAEEWTAFQQSSFYQLLRSGWPREEGPEGPPGEMGKPGHQGPRG
EAGERGRPGIPGEMGEMGLRGPPGPQGPPGRDGENGEDGLPGPPGVPGSAGTWGYRGERG
AKGEKGDEGLMGISGQRGDTGEPGEKGSVGLPGPLGSMGLPGPQGVRGVEGLEGPPGPDG
EAGQDGILGLPGPHGAPGLTGQVGVQGVSGTRGDMGPAGSVGLPGPQGPPGLEGQIGVTG
LRGLQGPLGPAGPRGEPGFEGPMGPPGTKGEAGFPGAPGPRGPDGDKGDQGAKGSRGMMG
AEGIRGPQGERGPTGFMGFPGTKGHLGAKGPEGPDGEAGAQGKQGAPGSKGNRGADGRSG
KAGPRGHRGLPGPPGPVGAEGKPGTQGPPGAGGSVGSNGPAGFTGVFGERGADGAPGSPG
PTGKPGPPGAPGPPGESGFTGKPGAEGPQGPVGMYGIQGTVGMHGPPGPSGEWGEQGVRG
LPGPPGKPGPPGPPGLTGAVGAAGKPGPRGGRGSPGPEGPMGPIGIPGPPGSPGDTGPPG
PDGAQGLPGSTGSEGPPGQKGEQGEPGSCGKLGPPGLPGERGAEGLKGPPGPTGPFGKEG
DVGVPGDVGDAGPRGEKGEPGPPGISGPEGPWGPLGANGERGPKGEIGDTGLLGEPGPVG
DVGPTGLHGPQGSPGPPGAVGPDGPQGHKGDSGSTGPPGEPGMVGPQGAAGAQGVRGETG
KLGPPGAVGQPGPQGEQGAKGEPGPQGEKGEPGHLGPPGEQGEEGLPGIQGPPALPGLEG
SPGESGAQGPAGPPGNLGPAGRPGPEGKPGPKGEKGDDGETGPPGKAGHIGRRGKRGKAG
VRGRRGDRGPKGQKGDSGVLGLPGWPGFIGSPGSRGEPGDQGQKGKQGEKGDMGLDGPPG
PQGPKGVRGDPGLPGPVGAKGEQGMIGPPGMRGASGMPGLPGLFGLKGLKGFPGLPGLPG
RPGYPGPPGLPGPPGASLNMTLTQLKDLMYLSDKPNLSVLQSLVESLQLELRLILDPPDG
SKERPATTCLELWLCHPDYTSE
NT seq 4929 nt   +upstreamnt  +downstreamnt
atgtctgggtgctgctggcctccgtggaccctgtgcctgctcccgctgctgttgcgcaac
acgtgctcggccgaagctccggaccgagctgatccggaccgggcggctcgtagtgctctg
gaccgggctgctctggaccgggctgttctggacggggctgttctggaccgggctgttctg
gacggggctgttctggaccgggctggtgtggaccgtgctgctctgggggactcgggagga
gagtccggttcggggatgctgctcccggatgagctgaacgtcctgcaggagctctggcct
catgtgtccaaccgcaccaactcctctgtgagactggagcgaggaggatgtcctatactc
caactgggacaatactccaccctgaccctggctctcagacacgtcctctatgacaggttt
gcagacgacttcagtttgctggtgcacttccggagccggcagaaggaggagcgcagtgtg
tgctccatcctcagcccagagggtcacgtgacactgcagctccgggtcagctccacagcc
atcaccttcatcggctcccaggacaggcactacgagtttccttgtgcgggtctgtctgac
gggaagtggcatcgcgtggctctcagtgtctcgtctaagcgcttggctgtgtttgtggac
tgcgctctgctggagactgtggagtgggtgcactttggactgggcatcggtctggacggg
ctgctcatggtgggagggaccaccgggacttatgacactccatttgagggcgagctccgt
cagctgagctttgtgttgggtgagcctgatgtggcccggagccagtgcagccggccccag
tcccactgtgacgggaccttcttgaagcctggacgagcccctcgcacacacagcaacaac
aacaggctggagaatctgctgctgtcctcaaacgacctggagaatcttctggggagtcct
gaggagagctcgttcctgggcttgagccagactcacctgtataaaagacacctgtccaca
gaatctgtcaatcaatcagactccaaacccttcaacatgggaaagaccaaagagctgtca
aaggacgtcagggacaagactgtagacctgcacaaagctggaatgggctacaaaatcata
agcaagaaactggtgttaaggagacaactgttgggtttgttcccacggcctggagcttct
cgtggagatgggacagtgccctcaggaccagagcgtaaaggcaccatcacccgaggagat
gtgtttgtggtggatgaagacaccgacctcatggaccccttcttcatacaccccaactgg
aaacctccgaggaacagtcagaagagccaccaaaagggaaagcccgacgtgtccaaggac
ctggaggagaacattaccacagataaaaagacagacgctggtgggaggactatccctata
tatcctggaaaaccttcagatgacatcattgatctggatgcaggagtagcccccaagaag
ccctctgttactccaaaatcctccgttaaagcagaggagctcaaacccaccagctcacac
tcaggcccgagcagagagcccgtgaagcaggagcagcctcgagtgatcagcgccgtgtcc
agggagggagacctggtgctgggatctgacgggaaatggtacaggctccagagaggccct
aaaggtcgaatgggaccccctggacctgaaggttgtcctggtgatgtgggtctgacagga
tttaagggagataagggtaagactggtcctgaaggcagaccaggaaggagaggagagcca
ggacctccaggacctgcaggtttacccacgctctacctgtggaggaacacagcagaggag
tggactgccttccagcaaagcagtttctaccagctgctgcgctctggctggcctagggaa
gaaggccccgaaggaccacctggagagatgggcaaacctggtcatcagggtccacgtggt
gaagctggagaacgaggccgaccgggaattccgggagaaatgggggagatgggtcttaga
ggccctccaggaccacaaggacctcctggacgagatggagagaatggagaggacggtctg
cctgggcctcctggagtccctggatctgcaggcacgtggggctatcgaggagagagagga
gctaaaggggagaaaggtgatgagggtctcatgggcattagtggacaaagaggagacact
ggtgaacctggagagaagggttctgttggtttaccaggccctcttggatctatgggactg
ccagggcctcagggagtgagaggggtcgaggggctcgagggccctcctggacctgatggg
gaagcaggtcaggacggcatactcggtttgccaggcccacatggagctccaggtttgact
ggacaagttggggttcaaggagtcagtggtacacggggtgacatgggtcctgctggcagt
gtgggcctgcctggtcctcagggtcctccagggttagagggccagataggagtcactgga
cttaggggccttcaggggccgctggggcctgctggccctcggggggagcctggcttcgag
gggcccatgggcccaccggggacaaagggggaggcaggatttcctggagctccaggcccc
cggggtccagatggggacaagggagaccaaggagccaaaggaagccgaggcatgatgggg
gccgaaggcattaggggccctcagggagagaggggccccactggtttcatgggtttccct
ggaacaaagggccatcttggagccaaaggcccagagggccctgatggagaagctggggca
caaggaaagcagggagccccaggttcaaagggcaacagaggagcagacggacgcagcggt
aaagcaggcccaagaggacacaggggtttgcctggacctccaggaccagtgggagcagaa
ggaaagcctggtacacagggtcctccaggagcagggggcagcgtgggcagtaacgggcca
gcgggcttcacaggtgtttttggggagagaggagcagacggagcgcctggatcccctggc
cctacagggaaaccaggacctccgggtgcaccaggacctccaggggagagcggcttcaca
gggaaacctggagcagaggggccccagggccctgtgggcatgtatggaatccaaggaact
gtggggatgcacggacctccaggcccctctggtgaatggggtgagcaaggagttcgaggt
ttacctggacctccaggaaagcctggacctcctggacctcctggtttaactggagctgta
ggagcagcaggaaaacctggccccagaggaggcagaggctccccaggacctgagggccct
atggggccaataggaatcccaggtccaccgggctcacctggagatactggaccacctgga
ccagatggagcacagggtctgcctggttctacagggtcagagggacctcctggacagaag
ggagaacagggtgagcctggatcatgtgggaaactaggacctccaggactcccaggagaa
aggggggcagagggactcaaaggccctccaggaccaacaggaccattcggtaaagaggga
gatgttggtgttcctggtgacgttggagacgcgggacccaggggagaaaagggtgagcca
ggacctcctggtatatctggtccagaaggcccctgggggccccttggagcaaacggggag
cgaggccctaaaggagagattggtgacactggactgctgggagaaccggggccagtggga
gacgtagggcccacaggactgcatgggccacagggctccccgggtcctcctggagctgtg
ggaccagatggaccgcaaggacataagggtgattctggctccacagggccgcctggagag
cctggtatggttgggcctcagggagcagcaggagctcaaggagtcagaggagagactggc
aaactggggccccctggtgcagtgggtcagcctggacctcagggagaacaaggagctaaa
ggagaaccaggaccacaaggagagaagggagagccaggtcatctgggaccaccaggtgaa
cagggagaagaaggcttaccaggaatccaaggtcctcctgccctgccaggactggagggg
tccccaggtgaaagtggagcccagggcccagcaggacccccagggaatctaggtccagct
ggaagaccagggcctgagggaaaacctggaccaaaaggagaaaagggagacgatggagag
actggtccacctgggaaagcaggtcacattggaaggaggggcaaacgaggcaaagccggt
gtacggggcaggagaggagacagaggaccaaagggccaaaaaggagacagtggagtgttg
gggcttccaggctggcccggtttcattggaagccctggatcacggggggagccaggggat
cagggacagaaggggaaacagggggagaaaggagacatggggctggacggacctcctggg
cctcaaggccctaagggtgtccgtggtgatccagggctgccaggtccagtgggtgcaaag
ggagaacagggaatgattggtccaccagggatgcggggagcatcagggatgccaggactg
ccgggtttgtttggtctgaagggtttgaagggcttcccaggtttacctggtctaccgggg
agaccgggttacccaggccctcctgggcttccagggcccccaggggcgtctttgaacatg
accctgacacagcttaaggacctgatgtatctgtcggacaaaccaaacctgtctgtgcta
cagtcgctggtcgagtccctgcagctggagctccggctcatcctggaccctcctgatggg
agcaaggagcgccctgctaccacctgtctggagctgtggctgtgtcaccctgactacacc
agcgagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (99)   
   KEGG ORTHOLOGY (1)   
   RefGene (95)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (111)   

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