KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110172752
Entry
110172752         CDS       T05002                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03013  Nucleocytoplasmic transport
bpec03015  mRNA surveillance pathway
bpec03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110172752 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    110172752 (rbm8a)
   03015 mRNA surveillance pathway
    110172752 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpec03019]
    110172752 (rbm8a)
   03041 Spliceosome [BR:bpec03041]
    110172752 (rbm8a)
Messenger RNA biogenesis [BR:bpec03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110172752 (rbm8a)
Spliceosome [BR:bpec03041]
 Complex C
  Other components
   EJC/TREX
    110172752 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 110172752
NCBI-ProteinID: XP_020794344
Position
Unknown
AA seq 175 aa
MADVLDLHEAGAEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRVKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKHKRRVGGRRRSRSPDRRRR
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggacgtgctggatcttcacgaggcgggagcagaagatttccccatggacgaggac
ggcgacgaaagtatccacaagctgaaggagaaagccaagaagaggaagggacgaggcttt
ggctcagaggaaggagctcggtcccgggtcaaagaggactacgacacggtggagcaggac
ggagacgagcctggtcctcagagatcggtggagggctggatcctgtttgtgaccggtgta
cacgaggaggccacggaggaggacatccacgacaagttctcggagtttggagaaatcaag
aacctgcatttaaacctggaccgccgaacgggctacctcaagggttacgctctggtggag
tatgagacgtacaaagaggctcaggcggcgatggagggtctgaacgggcaggacatgatg
ggacaaccaatcagtgtggactggggcttcgtacgaggacccccgaaacacaagaggagg
gtcggaggtcgtcggcggagcaggagtcccgaccgcaggagacgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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