KEGG   Bordetella pertussis B1917: B1917_0532
Entry
B1917_0532        CDS       T03638                                 
Name
(GenBank) primosomal protein
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
bpet  Bordetella pertussis B1917
Pathway
bpet03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpet00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    B1917_0532
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpet03400]
    B1917_0532
Enzymes [BR:bpet01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     B1917_0532
DNA repair and recombination proteins [BR:bpet03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     B1917_0532
SSDB
Motif
Pfam: PriA_3primeBD DEAD PriA_C ResIII Helicase_C PriA_CRR AAA_30 AAA_25 zinc-ribbons_6 AAA_16 HypA
Other DBs
NCBI-ProteinID: AIW91066
Position
complement(542582..544624)
AA seq 680 aa
MRVALDVPLPGPFDYRSAAPLPLGARVIVPFGRRKLVGVVVEHPGQPSIDPAQVREVEQP
LEDLPPMPADWMRLARFAADYYQRPLGEVMLPVLPPPLRKPSAYQGKRSGLGPVARLDAR
KPRAAAAVAAEPDQAPELNEAQREAVDTIGALSAFQPVLLHGVTGSGKTEVYLHAAARVL
QAGRQVLLMVPEINLTPQLEGALRARLEALVGPQGVAILHSGLADGERVQAWARAQRGQA
RLLLGTRMSIFAPLPELGLIVVDEEHDPSYKQQEGLRYSARDLAIWRARDLDIPVVLGSA
TPSLESWQHAERGRYLRLTLPGRARASSLPEIRLIDTRRLQLKQGLSPQFIEAIGQRLER
GEQSLVFLNRRGYAPVLHCASCAWVSHCPRCSTFTVLHRGPGAGGYRLQCHHCGYQAPVP
RACPECGDQDLEPMGRGTQRIEEQLAEWFPQARIARIDADSTRRKGSAQALFAAVHAGEV
DIMVGTQMVAKGHDFARLGLVGVLNADSMLFAHDFRAPERLFAQLMQVAGRAGRHAAGAQ
VLIQTGYPEQPVYQALLRHDYAGFARHALQEREDTGLPPFAYQALLTAEARELTVAQGFL
QRARDLATGEPWPGVDAITLYDPVPLRVVRVAHVERAQLLIESTSRPALQGFLTAWAACL
PQLAVEARVRWQLEVDPLEI
NT seq 2043 nt   +upstreamnt  +downstreamnt
gtgcgcgttgcgctggacgtcccgttgccggggccgttcgattaccgcagcgcagcgcca
ttgccgctgggcgcgcgcgtgatcgtgccgttcgggcggcgcaagctggtcggggtggtg
gtcgaacatcccggccagccgtccatcgacccggcgcaggtgcgcgaggtcgagcagccg
ctcgaagacctgccgccgatgccggccgactggatgcggctggcgcgctttgcggccgat
tactaccagcggccgctgggcgaggtcatgctgccggtgctgccgccgccgctgcgcaaa
ccgtcggcttaccagggcaagcgctccggcctgggacccgtggcgcgcctggacgcgcgc
aagccgcgcgccgcggcagcggtggcggccgagccggaccaggcgcccgaactgaatgaa
gcgcaacgcgaggcggtcgacaccatcggcgcgctgtcggcgtttcagccggtcctgctg
cacggcgtgaccggcagcggcaagaccgaggtgtacctgcatgcggcggcgcgcgtcttg
caggccgggcggcaggtcctgctgatggtgcccgagatcaacctgacgccgcagctcgaa
ggcgccttgcgtgcacgcctggaggcgctggtcgggccgcagggcgtggccatcctgcac
agcgggctggccgatggcgagcgcgtgcaggcgtgggcgcgcgcgcagcgcggccaggcc
cgcctgctgctgggcacccgcatgtcgatttttgcgcccctgccggaactgggcctgatc
gtggtcgacgaagagcacgatccttcctataagcagcaggaaggcctgcgctattccgcg
cgcgacctggccatctggcgcgcccgcgacctggatatcccggtggtgctgggttcggcc
acgccgtcgctggaaagctggcagcatgccgagcgcggccgctacctgcgcctgacgctg
cccggccgggcgcgcgccagcagcctgccggagatccgcctgatcgacacgcgccggctg
caactcaagcagggtctgtcgccgcagttcatcgaggcgatcggccagcggctcgaacgc
ggcgagcagtcgctggtgttcctcaaccggcgcggctacgcgcccgtgctgcattgcgcg
tcgtgcgcatgggtcagccactgcccgcgctgctcgacgttcacggtgctgcaccgcggc
ccgggcgccggcggctatcgcctgcagtgccaccactgcggttaccaggcgccggtgccg
cgcgcctgcccggagtgcggcgaccaggacctcgagcccatgggacgcggcacgcagcgc
atcgaggagcaattggccgagtggtttccgcaggcgcgcatcgcgcgcatcgacgccgac
agcacgcgccgcaagggcagtgcgcaggcgctgttcgcggccgtgcatgccggcgaagtg
gacatcatggtcggcacgcagatggtggccaagggacacgacttcgcgcggctcggcctg
gtgggcgtgctcaacgccgactccatgctgttcgcgcacgacttccgcgcgcccgagcgc
ctgttcgcccaattgatgcaggtggccgggcgggcgggccgccatgccgccggcgcgcag
gtcctgatccagaccggctatcccgagcaaccggtctatcaggccctgttgcgccacgat
tacgccggctttgcgcgccacgccctgcaggagcgcgaagacaccgggctgcccccgttt
gcctatcaggctttgttgaccgccgaggcgcgcgaactgacggtggcgcagggctttctg
cagcgcgcgcgcgacctggccacgggcgagccatggcccggcgtggacgcgattacactc
tacgatcccgtgccgctgcgcgttgtgcgcgtggcccacgtcgagcgtgcccagctgctg
atagaaagcaccagccgccccgccctgcagggtttcctgacggcctgggcggcctgcctg
ccgcaactggccgtcgaggcgcgcgtacgctggcaactggaagtcgatccgctggagatc
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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