KEGG T01165: BpOF4

Bacillus pseudofirmus: BpOF4_11840

Entry

BpOF4_11840 CDS T01165

Gene name

recD_traA

Definition

ATP-dependent exoDNAse V

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

bpf Bacillus pseudofirmus

Pathway

bpf03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:bpf03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 HHH_5 UvrD-helicase AAA_22 AAA AAA_12 UvrD_C AAA_16 T2SE Zeta_toxin AAA_28 AAA_17 Herpes_Helicase NTPase_1 AAA_25 DUF2075 AAA_29 AAA_18 AAA_10

Other DBs

NCBI-GI:

288555378

NCBI-GeneID:

8767416

UniProt:

D3FVY9

Position

807290..809608

AA seq 772 aa
MDEQQSLEQDNGIERGYIKGEVLHLVFRNDENAYTVALIRVSETNEELKDKKITVVGILP
QLDVAETFLFFGTITDHPRFGQQYQVEQFRRDLPQTKNGIIQYLSSDRFPGIGKRTAETI
VEVLGERAITRIVEDRAVLKAVPKLSKEKADQLYQQLIDQQGVEQVLMTLSKHGFGLELS
MKVYQKYGFQALDIIQTNPYQLIADVEGIGFRKADLLGAAIGLTGNHPDRIRAGLLFVVQ
ELCLQDGHVYIEKEELIPHVKQLLSSPDASISTEEVEHELLTMEEEDALVLEETRVYIKS
LYFAEKGIVSSVRRLMATEVKDEFPESEFLKTLGELEEELKIEYAPQQKEAIQTALANPF
MLLTGGPGTGKTTVIKGIVETYARLNGLSLDPKAYTKSNPFPILLVAPTGRAAKRMSEAT
ELPAVTIHRLLGWKGGNGGFEKGEHEQLEGELIIVDEVSMVDIWLANQLLKAIPKGMQVV
FVGDQDQLPSVGPGQVLKDFLDAEVVPTVPLTAIYRQKEGSSIIELAHEMKQGKMPSDLP
EAKPDRRFFPCTTDHVQHVVTQICENAIKKGYLARDIQVLAPMYKGQAGITELNRILQEL
FNPKTEQKRELLYGELAYRTGDVVLQLVNNPDENVYNGDRGEIVAIFYAKENTEKQDQVV
ISFDGTEVVYNKKDLNQITHAYCCSIHKSQGSEFPIVVMPVVRNYSRMLRRNLIYTGITR
AKKFLLLCGELKSFHTAVTREDELIRYSMLKDKLVSLKQSQQEYENGNGQLT

NT seq 2319 nt +upstreamnt +downstreamnt
atggatgaacaacaatccttagaacaagataacggaatagagcgtggctatataaaaggc
gaggttctccatctcgtctttagaaatgatgaaaatgcctacactgtagctctgattcgg
gtcagtgaaacaaatgaagagctaaaggataagaaaataacggtagtgggaatccttccg
cagctggatgtagcagaaacctttttgttttttgggaccatcactgaccatccacgtttt
ggacagcagtatcaagtagagcaatttagacgagatctgcctcaaacaaagaacggcatc
attcaatatctttcaagtgatcgcttccctgggatcggcaagaggacagcagaaacgatt
gttgaggtattaggggaaagggccattactcggattgttgaagaccgagctgtactaaaa
gctgtaccaaagctctctaaagaaaaagcagaccaattatatcagcagctcatagaccaa
caaggagttgaacaggtcctaatgacgctgtcaaagcacggatttggtcttgaactatca
atgaaggtatatcaaaagtatgggtttcaagcacttgatattattcaaacaaatccttat
cagctgattgcagatgtagaagggatcggatttaggaaggctgatttacttggagctgcg
attggtttaacagggaatcacccagacaggatccgagcggggcttttgtttgttgtacaa
gaattatgcttacaagatggacatgtctatatcgaaaaagaagaattgatccctcatgta
aaacaactgttatcgtcaccagatgcatcaataagtacagaagaagtcgagcatgagctt
ttaacgatggaagaggaggatgcgcttgtacttgaggaaacgcgcgtctatataaaatca
ctgtattttgctgaaaaaggaattgtctcaagtgtaaggagactcatggctacagaggtt
aaggatgaattcccggaatcggagttcttaaaaacactaggcgagcttgaggaagagtta
aaaattgaatacgcaccgcagcagaaagaagcgattcaaacagcgttagctaatcctttt
atgctccttacaggggggccgggaacgggaaagacaaccgttattaaaggaattgtcgaa
acgtatgcaaggcttaacggtttatcacttgaccctaaagcgtacactaaatccaatcca
tttccaatcttacttgtcgcaccaactggaagagcggcaaagcggatgagcgaggcaaca
gaactgcctgctgttaccattcataggctgcttggctggaaaggcggaaatggtggattt
gaaaaaggagaacatgagcagctggaaggagaattgattattgtcgatgaggtttcaatg
gttgacatctggcttgctaatcaattgttaaaggcgatccctaaaggcatgcaggtcgtt
tttgtaggagatcaagatcaattgccttcagttggacctggccaagtacttaaagacttc
ttagatgcagaggtcgttccaacagttccgttaacagcgatctatagacaaaaggaaggc
tcctcgatcatcgaactcgcccacgagatgaaacaagggaaaatgcctagcgacctgcct
gaagcgaagcctgatcgacggttctttccgtgtacaaccgatcacgtccagcatgttgtg
acacagatttgtgaaaatgctataaaaaaagggtatcttgccagagacatacaagtgctg
gctccgatgtataaagggcaggctgggattacagaactcaatcgtattctccaggagctt
ttcaaccctaagacagagcaaaaacgagagcttttatacggggaacttgcttaccggaca
ggagatgttgtacttcagcttgtaaacaatcctgatgaaaatgtgtacaacggagaccgc
ggagaaattgtggcgattttctatgcaaaagaaaatacagaaaaacaagatcaggttgtg
attagttttgatggaacagaggttgtctacaataagaaagatttaaatcaaattacacat
gcttattgctgttcgatccataaatcgcaaggaagcgaatttccaatcgttgtcatgcct
gtagtacgtaattattctcggatgctgaggagaaatttaatttatacagggattactcgg
gcaaaaaaattcctgcttctatgcggcgaattaaaatcctttcataccgcagttacacga
gaagatgagttaatcaggtattcgatgttaaaagacaagcttgtctccctaaaacaatct
caacaggaatatgagaatggaaatggtcaactaacataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (24)   
   Pfam (24)   
All databases (33)   

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