KEGG   Bathycoccus prasinos: Bathy01g01310
Entry
Bathy01g01310     CDS       T03089                                 
Name
(RefSeq) ribosomal RNA large subunit methyltransferase N
  KO
K06941  23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Organism
bpg  Bathycoccus prasinos
Brite
KEGG Orthology (KO) [BR:bpg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bpg03009]
    Bathy01g01310
Enzymes [BR:bpg01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.192  23S rRNA (adenine2503-C2)-methyltransferase
     Bathy01g01310
Ribosome biogenesis [BR:bpg03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Bathy01g01310
SSDB
Motif
Pfam: Radical_SAM RlmN_N Fer4_12 Radical_SAM_2
Other DBs
NCBI-GeneID: 19017867
NCBI-ProteinID: XP_007515408
UniProt: K8E9A9
Position
1:245449..246810
AA seq 453 aa
MFASLLKSTSFATSSFSPRRRHHHHKKQALRIRHLSAAANDDDDDDFPNDNNEFDYDVVS
VPRNPGIKSGKWNQNDMEIVKTAQKDANEKASGTSSLLAPSNDLTLLGLTENELKVFAER
NGTQKFRGKQIKDFIYKHRVKSIMEMTQLPKDLRESWDGLGVTIGRNEVYAKKSAPDGTT
KLLMKLDDNRIVETVGIPSNEYGKSRLTCCVSSQVGCPMRCEFCATGKGGFYRNLTAREI
VDQVMAIEEEFGGRRVSNVVFMGMGEPMLNVPNVVKATELLNKEIGIGMRHISISTVGVF
GALEKLASYEMQCVLAVSLHAPNQKIREEIIPSARAYSFDDILNDCVAYFNATGRRVTFE
YTLLAGVNDQKEHAKELAQVLFKKNLASHVNLIPYNPVDDSDFKRPTKQAIDQFRRILEE
NNVPTSVRQTRGLEAAAACGQLRNMYQKEALVA
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtttgcctcgctgctcaaaagtacttctttcgcgacgtcttcgttctcgccgagaaga
cgacatcatcatcataaaaaacaagcgcttcggattcgccacctgtcagcagccgccaac
gacgacgacgacgacgatttcccgaacgacaacaacgagttcgattacgacgtcgtctcg
gtcccgagaaacccggggattaaatccggaaagtggaaccaaaacgacatggaaattgtg
aaaacggcgcaaaaagacgcgaacgagaaagcgtcggggacttcctcgctcctcgctccg
tcgaacgatttgactttattgggcttaacggaaaacgaattgaaagtcttcgccgagcgc
aacgggacgcaaaagtttcgagggaaacaaatcaaagatttcatatacaaacaccgagtg
aaatcaatcatggagatgacgcagttaccgaaagacttacgagagagttgggatgggctc
ggagtgacgattgggaggaacgaggtgtacgcgaagaaatccgcgccggacgggacgacg
aaactgttgatgaagttggacgataacaggatcgtcgagacggttgggattccgagtaac
gagtacggaaagagtcgtttgacgtgttgcgtgagcagtcaggttggatgtccgatgaga
tgcgaattttgcgcgactgggaaaggtggattttatagaaatttgaccgcgagggagatt
gtcgatcaggttatggccatcgaggaggagtttggcgggaggagggtgagtaatgtcgtg
ttcatggggatgggagagcctatgttgaacgtgccaaacgtggttaaagcgacggaactt
ttgaacaaagagattgggattgggatgcgacacatatcgatatcgaccgtgggtgttttt
ggcgctttggagaaactggcgagttacgagatgcagtgcgtgttggcggtgagtttacac
gcgccgaatcaaaaaatcagggaggaaatcatcccaagcgcgagagcgtattcgttcgat
gatattttgaatgattgcgtggcgtattttaacgccactgggaggagagttacgtttgaa
tacacgctgttagccggcgtgaacgatcaaaaagaacacgccaaagagttggctcaggtg
ttgtttaagaagaacttagccagtcacgtgaatttgattccgtataatccggtagatgat
tccgatttcaaaaggccaacgaaacaagcgatcgatcagtttcgaagaatattggaggag
aataacgtgccgacgagtgtgagacaaacgagaggtttggaggcggcggctgcgtgtggg
cagttacgaaatatgtatcaaaaggaagcgctggttgcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system