KEGG   Bathycoccus prasinos: Bathy09g00100
Entry
Bathy09g00100     CDS       T03089                                 
Name
(RefSeq) hypothetical protein
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]
Organism
bpg  Bathycoccus prasinos
Pathway
bpg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Bathy09g00100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpg03019]
    Bathy09g00100
Messenger RNA biogenesis [BR:bpg03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     Bathy09g00100
SSDB
Motif
Pfam: Helicase_C OB_NTP_bind DEAD HA2_C AAA_19 HA2_N dsrm AAA_22 ATPase nSTAND3 T2SSE MecA DUF917
Other DBs
NCBI-GeneID: 19013517
NCBI-ProteinID: XP_007511336
UniProt: K8FF80
Position
9:13857..18839
AA seq 1660 aa
MSVRRIRSITSSTVARNILSRTAQKSFTSFSAPPILRLKVTATKPTAPSALTLTALTIHS
SSRRMFCRVVPSNVSSSSSMSMQSHSSGTRVGSSTFANGGVCLRRAFFYYPRTMTTTTTH
VGRQQSFLLTERQQRKAGTNRVRRSFQFAPVSKQSASGGSRNTRSNATNGARGNASAASP
GPGAASKPKPSSASTASSSASSAKTATLPKAPRAPKKKKGPANGANGGGAGAGDKSSPPS
NRRNNNNNKTGRNRNGGGRGNQQQKNFKKNSAASGANQNESLNANVLTCPNGRERLKRKE
AKEFLDLFKEQTGGTALCKSVDDSKNVLHFVQQKMLFKQKISYQTSGPPHSRRFVSTLEV
PIQTAAFQSLDVLPSSATVNGDVVTFMGGGIAFTKRESSSLAALDILKQLLESGIDPKAP
PSVAKMKEKEMKERIQNAQALLELVDSSRPSIDISKRRDGKAGFEAVLSCFVDGGKKLEG
VGYGKSKSEAEGNALLNASEEPLKELLGENVMKRLQKVIADSPGGHVATLRIQALPDEAV
EVLVNAMGSPDEHDERVMALKTECQELERRREEKAARNAESGGNTSWRKKGENLNEYLFK
SKNAEDLSKAEEILVSKYREEQAKTSQEILQEEIERERRANEDIDSEEAKMARFREKLPI
IELKEDMLKALETQSVVVVSGGTGTGKSTQCPQYILEDALRKGRGAETKIIVTQPRRIAA
ISVAERVAAERCEPIGNSVGYRVRLHGSEPRSIGGTVQFVTTGVLLRRLVRDPEISDVSH
VIIDEVHERDINTDFLLVLLKELIQTRRDLKVILMSATLDAESFSKYFTMDTDIARQTPL
LSVPPKPRHPVELHYLEDILEQTQSDNSRNGDGLGIPSANSNVNDDGDDIIVQNNENEIT
KIGQDDDWPPIVRRLAAELLHVQDISLARELEEVEAESRASMQIERIADAEDAGEQPEFS
EDEYEDDDEDDSVDDDDDSLNAWEDRMKNDGRKHSHGRPRLQALRKAVALKNDRSELGKP
GVSGFGGGKMRVNKNTKLGDRDQSEVAVNLVAEIATHIANKEIENNRKGTVLCFLPGWDE
IKAATELIRKSTTYNEDTMKIMPLHSSVPQEEQQAVFTPAKEGTMKIILSTNIAESSVTI
DDVLSVIDAGLVREMSYNAESAMSSMETVLISSASATQRSGRAGRVAPGSCFRLYSRGVH
ASMAERPTPEIQRTALEATCLQTAAMTESGIQRFLSRALDPPSEDTVMYAVDRLTKLGAI
QTIESGEKLTALGRTISNLPIDPAIARMLLLGCVTKCLDPVLTAAASYSSRDPFYTPPGM
RDEARAIRKSFHDSSDLLSVCRAWDQCNDLFNNRDYDTARRWGSDNFISIAAMSNLTSVR
SQLLSDLVKLGFVSERDCEGYGQRRVLRYDSGINTHANNEALFKGILATGLPSNLAARRS
LGAFGTLRTRTESHAGLHPSGVAFHRKPPRGVAPLPKWFVYREMVLSSSVFLRDSTALSP
EQVAMFAGHQISFAPKVEEAQNDSTESDDGLLNADGSVNASMDIDMSFDGDDMVPSSRFD
RSAAGRAKFLLDEWVFLDSNCEDTMDLLRDAREELNMALNWRVMYPRKPPPESSEEIVDA
IAQMLRIVDERERRKNRSRARFSRQSPSSSSSGAPSRRKF
NT seq 4983 nt   +upstreamnt  +downstreamnt
atgtcggtgagacgaattcgttctatcacatcctctactgttgcgcgaaacatactctca
cgcacggcgcaaaaaagctttacctcgttttccgctcctccaattcttcgactaaaagtg
acggcgacgaagccaacagccccgtctgctcttactcttactgctcttactattcattct
agcagcaggagaatgttttgtcgggttgtaccatctaatgtgtcgtcttcctcgtcaatg
tctatgcaaagtcattcgtcaggtacgcgagtaggatcctcgacgttcgcgaacggtggc
gtctgtcttcgtcgtgcgttcttttattatcctcgaacgatgacgacgacgacgacacac
gttggccgccagcaaagcttcttgctcacggagcgacaacagcgaaaagcgggaactaat
agggtacgaagaagctttcagtttgctccagtttctaaacaatcggcatcgggtggctcg
agaaatacaagaagcaacgcgacgaatggtgcccgaggaaatgcgagcgcagcatcccct
ggtcctggtgctgcaagcaaaccgaaaccatcgtctgcgagcactgcttcctcttcagcc
tcctctgcgaaaactgcgactttaccaaaagctccgcgagcgccgaaaaagaagaaaggg
ccagcaaacggcgcaaacggcggtggcgccggcgccggcgacaagagtagtccgccgtca
aaccgaaggaataataataacaacaagaccggtcgcaacagaaacggcggtggtcgagga
aatcaacaacagaaaaacttcaagaagaattccgccgcgagcggcgcaaatcaaaacgaa
agcttaaatgccaacgttttgacgtgtccaaacggacgcgagcgattgaaacgcaaagag
gcaaaggagtttttagatctctttaaagagcaaactggaggcacggcgttgtgcaaatct
gtggacgattcaaagaacgtgttgcattttgtgcaacaaaagatgttgtttaaacagaaa
atttcgtatcagactagtggaccgccgcacagtaggcgtttcgtctctactctagaagtt
ccgatacaaactgctgcatttcaatcgttagatgtgttaccatcttcggcaacagttaac
ggcgatgtggtaacttttatgggaggcggcattgcgttcaccaaaagagagtcctcatca
ctcgccgctttggatatattgaaacagcttttagagtctggcattgacccaaaagcacct
ccaagcgttgccaagatgaaagaaaaagaaatgaaagaaagaattcaaaatgcgcaagct
ttactggagttagttgatagctcgagaccttctatcgacatatccaagagacgagatgga
aaagctggttttgaggcggtgttatcttgctttgtcgacggaggaaagaagctcgaaggt
gttggatacggtaaatcaaagtccgaagctgaaggaaacgcacttctgaacgcgtcggag
gaacctttgaaggagttacttggcgagaacgtgatgaaaagattgcaaaaagttatcgcg
gactctcctgggggccacgttgcaacgctgagaattcaagccttaccggatgaagcagta
gaagtcctcgtcaatgctatggggtctcctgatgagcatgacgaaagagtgatggctttg
aaaaccgaatgccaagaactcgaacgacgcagagaagagaaggcggcgcgcaacgccgaa
agtggaggaaataccagttggaggaagaaaggtgaaaacttgaacgagtacctctttaaa
tccaaaaatgcagaagatttatccaaagcggaggagattttggtcagtaagtaccgagaa
gagcaagcaaagacgtcgcaagagattttacaggaagaaatcgagcgcgaaagacgagcg
aatgaggatatagattcagaagaagctaaaatggcacgtttccgagaaaagttgccaatt
attgaattgaaagaggatatgttgaaagcgctagagacccaatcagtcgtagttgtttct
ggtggaactggtacgggtaaatctacgcaatgcccgcagtatattttagaagatgcccta
aggaaaggtagaggtgcagaaaccaagattatcgtcacgcagccgcgccgaattgcggca
atctcagttgccgagcgcgtcgccgcggaacgctgtgaaccgattggaaattccgttggt
taccgcgtccgtttacatgggtccgaacctagaagtattggtggtactgtccagttcgtc
accacgggtgttttgttgagacgattagttcgcgatccagaaatatcggacgtttcccac
gtgattatcgatgaggtacacgaaagggacataaacacggatttcttactcgtacttttg
aaggaattgattcaaaccagaagagatctaaaagtaatcttgatgtctgcaactctagat
gctgaatcattctcaaaatatttcacaatggataccgacattgctcggcaaacgccgttg
ctatctgtgccaccgaagccacgacatccagtcgaacttcattacctagaagatatacta
gagcaaacgcaatcagacaacagcagaaatggcgatggtttaggaataccgagtgcaaat
tcaaatgtaaacgacgatggtgacgatattatagttcaaaacaatgaaaatgaaataacg
aagattggccaagacgacgattggccaccaatcgttcgtcgtctcgcggctgaactattg
cacgtgcaagatatctcgctcgctcgtgagctcgaagaagttgaagcggaatcgagagcc
tccatgcagattgagcgcatcgctgatgccgaagatgctggtgaacagccagagttttcg
gaagatgaatatgaggatgacgatgaggatgacagtgtcgacgacgacgatgacagtttg
aacgcttgggaagatcggatgaaaaacgatggtagaaaacactcgcacggtcgaccgaga
ttacaagctttgcgtaaagccgtcgcgctgaagaacgatcgatcggagttggggaaacca
ggagtctctgggttcggtggtggtaaaatgcgagtaaataagaataccaaacttggtgat
cgcgatcagtccgaagttgccgtgaatttagtggccgaaattgcaacccacattgcgaac
aaagaaatcgaaaacaatagaaaaggtaccgtgctttgctttcttccaggttgggacgag
attaaagctgcaacagagctcatacgaaaatctaccacgtacaacgaagacactatgaaa
atcatgccgcttcattcgtccgtcccgcaagaagagcagcaagcagtgtttacgcctgcg
aaagaaggtacgatgaagataattttgtctacgaatatcgctgaatcgtcggtgactatc
gatgatgtactatctgtgattgacgctggtctggtacgagaaatgtcctacaacgcggaa
agcgccatgtcttccatggaaacggtattgatatcaagtgcttcggcaactcagagatct
ggaagagccggcagggtcgctcctggatcgtgctttcgtctctactctagaggtgtgcac
gcttctatggctgaacgccccactcctgaaatacagagaacggcattggaagcgacgtgc
ttgcagacggcagcgatgacggaaagtggtattcagagattcttatcgagagctttagat
cctccgagcgaagatacggtaatgtatgctgttgatcgattgaccaagctgggtgcgatt
caaaccattgaaagtggcgaaaagttgacagccttaggtagaacgatttccaatctaccg
attgatccagccatcgcgcgaatgcttcttttgggttgcgtcacaaagtgcttagatccc
gttttgacggcggcggcttcgtattcatctcgcgatccattttacacgcctccaggcatg
cgagatgaagcgagagctattcgcaaatcgttccacgactcttcagatttactctcggtg
tgccgggcgtgggatcagtgcaacgatctgttcaacaaccgggattacgacaccgctcgc
cgttggggctctgacaactttatctcaatcgcagccatgagtaatttgacttctgtccga
tcgcaattactgagcgatttagtgaaattaggttttgtttctgagcgagactgcgaggga
tatggtcaaaggagagtgttgcgttacgattctggaataaacacgcacgccaataacgag
gcgctttttaaaggcatattggcgactggtcttccttcgaatcttgccgcacgaagatct
ttgggcgcatttggtactttgcgtacgcgcacagaaagccacgcaggattgcacccctct
ggagttgccttccaccggaaacctccacgaggtgtcgctcctttgccgaagtggttcgtt
taccgtgaaatggtgctctcttcctccgttttccttcgagattcaactgcactttcgccc
gagcaggttgccatgtttgctggtcatcaaatctcgtttgcacctaaagtagaggaagct
caaaacgatagtaccgaaagtgatgatggtttactaaatgcggacggatcggtcaacgcc
tccatggatatcgatatgtcgtttgacggagacgacatggtcccgtcgtcacgtttcgac
cgcagcgctgcaggcagagctaagtttctcttagacgagtgggtatttttagattcgaat
tgcgaagataccatggatttactccgagacgccagggaagagttaaatatggcgctcaat
tggagagtaatgtatcctcgtaagccaccgccagagtcctcggaggaaatcgtggatgcc
atcgctcagatgctccgaatagttgacgaacgtgaaagaaggaagaatagatcgcgagcg
cgtttttcgcgacaatcgccttcttcttcttcttctggtgctccttcaagaagaaaattt
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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