KEGG B.phymatum: Bphy

Burkholderia phymatum: Bphy_1440

Entry

Bphy_1440 CDS B.phymatum

Definition 2-dehydro-3-deoxyphosphooctonate aldolase

Orthology K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase)
[EC:2.5.1.55]

Pathway bph00540 Lipopolysaccharide biosynthesis
bph01100 Metabolic pathways

Class Metabolism; Glycan Biosynthesis and Metabolism; Lipopolysaccharide
biosynthesis [PATH:bph00540]

SSDB

Motif Pfam: DAHP_synth_1 NeuB

Other DBs NCBI-GI: 186476198
NCBI-GeneID: 6242931
JGI: Bphy1440
UniProt: B2JIX1

Position 1:complement(1618953..1619807)

AA seq 284 aa
MKLGDFEIGLDKPFFLIAGTCVVESEQMTIDTAGKLKEICAKLKIPFIYKSSYDKANRSS
GKSFRGLGMDEGLRILSEVKRQLGLHVLTDVHSEHEIEPVASVVDVLQTPAFLCRQTDFI
HACARSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVS
DMRSLAIMRETGAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVATGIAGLFMETH
PNPAEAKSDGPNAVPLHRMADLLETLMTLDQAVKRTPFLENDFN

NT seq 855 nt +upstreamnt +downstreamnt
atgaaactgggcgatttcgaaatcggcctcgacaagccgtttttcctgatcgcgggcacc
tgtgtcgtcgaatccgaacagatgacgatcgacacggccggcaagctgaaggaaatctgt
gcgaagctgaagattccgttcatctacaagtcttcgtacgacaaggccaatcgcagcagc
ggtaagtctttccgtggtttgggaatggacgagggattgcgcatcctctccgaagtgaag
cgtcagctgggccttcacgtcttgaccgacgtgcacagcgagcatgagatcgagccggtt
gcatccgtcgtcgacgtgctgcagacgccggcgttcctatgccgtcagacggacttcatc
cacgcgtgcgcgcgttcgggcaagcccgttaacatcaagaagggccagttcctcgcgccg
cacgacatgaagaacgtgatcgacaaggcgcgcgatgcggcgcgtgaagccggtctgtcg
gaagaccgcttcatggcgtgcgagcgcggtgtgtcgttcggctataacaacctcgtgtcg
gacatgcgttcgctcgcgatcatgcgcgaaacgggcgcgcccgtcgtgttcgacgcgacc
cactcggttcaattgccgggcgggcagggcacgagttcgggggggcagcgcgagttcgtc
cccgttctggcgcgcgcggccgtcgcaacgggtatcgcgggcctgttcatggaaacgcat
ccgaatccggcggaagcgaagtcggacggtccgaatgctgtgccgctgcatcgcatggcc
gatctgctcgagacgctgatgacgctcgaccaggccgtcaagcgcacaccgttcctcgag
aacgatttcaactga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-BPH (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)

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