KEGG B.phymatum: Bphy

Burkholderia phymatum: Bphy_3003

Entry

Bphy_3003 CDS B.phymatum

Gene name gcvT

Definition glycine cleavage system aminomethyltransferase T

Orthology K00605 aminomethyltransferase [EC:2.1.2.10]

Pathway bph00260 Glycine, serine and threonine metabolism
bph00670 One carbon pool by folate
bph00910 Nitrogen metabolism
bph01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Nitrogen metabolism [PATH:bph00910]
Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:bph00260]
Metabolism; Metabolism of Cofactors and Vitamins; One carbon pool by
folate [PATH:bph00670]

SSDB

Motif Pfam: GCV_T GCV_T_C TrmE_N SoxG POPLD

Other DBs NCBI-GI: 186477749
NCBI-GeneID: 6244484
JGI: Bphy3003
UniProt: B2JJ71

Position 1:3367449..3368567

AA seq 372 aa
MTELKHTPLHATHRALNARMVDFGGWDMPVNYGSQIEEHRAVRTDAGMFDVSHMCVVDFT
GERVRAFFERALANNVGKLQTAGKALYSCLLNPQGGVIDDLIVYYFGEDHFRVVVNAGTA
EKDIAWFNKLNDEEGFGLTITPRRDYAIVAVQGPNAREKVWATVPHARAASEALKPFNAA
RVADTPFGELTVARTGYTGEDGFEIIVPAAHVEALWNALQAQGVRPAGLGARDTLRLEAG
MNLYGQDMDDDVSPLDAGLAWTVDLSAPREFIGRAKLEADGSKQSFVGLILHKDNGKAAG
VLRAHQKVVTPNGEGEITSGTFSPTMQESIAFARVPKGVQPGDVVHVQIRDKALPASVVK
LPFVRNGKVLVG

NT seq 1119 nt +upstreamnt +downstreamnt
atgaccgaactcaaacacaccccgctccacgccacgcaccgcgcgctgaatgcccgcatg
gtcgacttcggcggctgggacatgcccgtcaattacggctcgcagatcgaagagcatcgc
gcggtgcgcacggacgccggcatgttcgacgtctcccacatgtgtgtcgtcgatttcacg
ggcgaacgcgtgcgtgccttcttcgagcgcgcgctggccaataacgtcggcaagctgcaa
acggccggcaaggccctttactcgtgtctgctgaacccgcaaggcggcgtgatcgacgac
ctgatcgtctattacttcggcgaagatcatttccgcgtcgtcgtgaatgccggcacggct
gaaaaagacatcgcgtggttcaacaagctcaatgacgaagaaggcttcggcctcaccatc
acgccgcgccgcgactacgcgatcgtcgccgtgcagggcccgaacgcgcgcgaaaaagtc
tgggcgacggtgccgcatgcacgcgccgccagcgaagcgctcaagccgttcaacgcggcg
cgcgtcgccgatacgccgttcggcgagctgaccgtcgcgcgcaccggctacacgggcgag
gacggcttcgaaatcatcgtccccgccgctcacgtcgaagcactgtggaacgcgctgcag
gcgcagggcgtgcgccccgccggtctcggcgcgcgcgacacgctgcgtctcgaagcgggc
atgaacctgtacggtcaggacatggacgacgacgtgtcacccctcgacgccggtctcgcg
tggacagtcgacctgtccgcaccgcgcgaattcatcggccgcgcgaagctcgaagcggac
ggctcgaagcagtcgttcgtcggcctgattctgcacaaggacaacggcaaggcggcgggc
gtgctgcgcgcgcatcagaaggtcgtcacgccgaacggcgaaggcgaaatcacgagcggc
acattctcgccgaccatgcaggagtcgatcgcctttgcgcgcgtgccgaagggcgtgcag
ccgggcgacgtcgtgcacgtgcagatccgtgacaaggcacttccagccagcgtggttaaa
ctgccattcgtgcgcaacggcaaagtgctcgtcggctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-BPH (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)

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