KEGG T00704: Bphy

Burkholderia phymatum: Bphy_4358

Entry

Bphy_4358 CDS T00704

Definition

malate dehydrogenase

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

bph Burkholderia phymatum

Pathway

bph00020	Citrate cycle (TCA cycle)
bph00620	Pyruvate metabolism
bph00630	Glyoxylate and dicarboxylate metabolism
bph00680	Methane metabolism
bph01100	Metabolic pathways
bph01110	Biosynthesis of secondary metabolites
bph01120	Microbial metabolism in diverse environments

Module

bph_M00009	Citrate cycle (TCA cycle, Krebs cycle)
bph_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bph_M00012	Glyoxylate cycle
bph_M00168	CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:bph00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:bph00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:bph00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:bph00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2:complement(1385865..1386848)

AA seq 327 aa
MAKPAKRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQAAVKGVVMELED
CAFPLLAGVVVTDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGKALNEV
ASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVSSIE
KLVVWGNHSPTMYPDFRVATAEGQDLTKLINDEEWNRNTFIPTVGKRGAAIIEARGLSSA
ASAANAAIDHVRDWVLGTNGKWVTMGIPSDGSYGIPEDIVYGVAVTCENGEYKRVEGLQI
DAFSREKMDNTLNELLEERDGVQHLLG

NT seq 984 nt +upstreamnt +downstreamnt
atggctaagcccgcaaagcgcgttgccgtcaccggcgccgcaggtcaaatcggttactcc
ctgctgttccgcatcgccaatggcgacatgctcggcaaggatcagccggtcatcctgcaa
ctgctggacctgccgcaggcgcaagccgccgtcaaaggcgtcgtgatggaactcgaagac
tgcgcgttcccgctgctcgcgggtgtcgtggtcactgacgatcccaaggtcgcattcaag
gatgccgacgtcgcgctgctggtcggcgcacgtccgcgttcgaaaggcatggagcgcaag
gacctgctgtcggccaacgccgaaatcttcacggtgcaaggcaaggcgctgaacgaagtg
gcgagccgcgacgtgaaggtgctggtcgtcggcaacccggcaaacacgaacgcctacatc
gcgatgaagtcggcaccggacctgccgaagaagaacttcacggccatgctgcgtctggac
cacaaccgcgcgctgtcgcaactggctgccaagtcgggcaagccggtttcgtcgatcgaa
aagctggtcgtgtggggcaaccactcgcccacgatgtaccccgatttccgcgtcgcaacg
gcagaaggccaggatctgaccaagctgatcaacgacgaagaatggaaccgcaacacgttc
atcccgacggtcggcaagcgcggcgcggcgatcatcgaagcgcgcggcctgtcgtcggcg
gcttcggcggctaacgcagccatcgaccacgtgcgtgactgggtgctcggcacgaacggc
aagtgggtgacgatgggcattccgtcggacggctcgtatggcatccccgaagatatcgtc
tacggcgtcgcggtgacgtgcgaaaacggcgagtacaagcgtgtcgaaggcctgcagatc
gacgcgttctcgcgcgagaagatggacaacacgctgaacgagttgctcgaagagcgcgac
ggcgttcagcatctgctcggctaa

All links

Pathway (11)   
   KEGG PATHWAY (7)   
   KEGG MODULE (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BPH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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