KEGG T00704: Bphy

Burkholderia phymatum: Bphy_6318

Entry

Bphy_6318 CDS T00704

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

bph Burkholderia phymatum

Pathway

bph00020	Citrate cycle (TCA cycle)
bph00310	Lysine degradation
bph00380	Tryptophan metabolism
bph01100	Metabolic pathways
bph01110	Biosynthesis of secondary metabolites
bph01120	Microbial metabolism in diverse environments

Module

bph_M00009	Citrate cycle (TCA cycle, Krebs cycle)
bph_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:bph00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:bph00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:bph00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

pBPHY01:complement(887850..890525)

AA seq 891 aa
MGGFGATETRTAISDKRFLSTRLHNMSNDYSEQIAVQKSSSSPSSHPVPAGAQTILSLQV
ERFIDAHRRDGYRNADLDPLALPPRVATPELTPQFYGLDPTEVRPADQAGFPFALTVGEL
DQQLKRVYCGGLGLDCSGVRDDSIRRWLFNRMESELVCPQPTPQERDALLRRLLTVEMWE
RLVASRHGHAKRFSLEGCESLVPLLDALIESSAIDGVQQIFLGMPHRGRLNALVNLMDFP
VAEMLACLDHESDIAAMQTDLPYHLGGAALKRTAHGEIALLLAHNPSHLQSVYPVVSGMA
RAWQDEHLDAACVPVVVHGDAAFAGQGIVMETLNMTRKSGYTLGGTIHVIVNNQIGFTTP
NPMSVHDNSYCTDIARMIDSPVIHVNADYPEDVIRAARIAFDYRMRYEADVVIDLIGYRR
LGHSEHDIPAITQPRAQASVALHPTVTARYHAAMGATVPLAELRADALRVLQADAVKRRA
PAHVSDASGKGAARSNRPLSLERIRSLTAAMTRVPGGFRLHDFVASLIEKWQSTVAFADH
AVDWCFAENIAYASLLEEEFDIRLSGMDVGRGTFMHRHAVWHAQDAHTAAESVHVPLRHI
AARQGAFDIVNSPLTEEAALGFEYGYSVQTNKRLTVWEAQFGDFVNGAQVIIDQYIAAGE
YKWGYQSALTVLLPHGHEGVGPEHSSGYLGRFLQLCAGDNLRVVVPSTSAQWFHLLREQA
RAEPAQPLVVMSPKSQLHGNCASHSPLSDFIDGSFNPILPDPGIVDPRVVTRVVLCSGKL
FYELQRARDESRDTSTALVRVEQLYPFPHDALASLLSGFEKLEEVVWAQEEDRNQGAWRF
VREALEQVLPRGSRLRDVCRTLTASGAHASIRAHQKEQCRIVASALSRPSR

NT seq 2676 nt +upstreamnt +downstreamnt
atgggtggattcggggcgacagagacacggacggcgatttccgataaacggtttctctcc
acacgtctacacaacatgtccaacgattattccgagcagattgcggtccagaagtcttct
tccagcccctcttcgcatccggtgccggctggtgcgcagaccatcctttcgttacaggtc
gagcgctttatcgacgcacatcgacgcgacggctaccgcaatgcggaccttgatccgctc
gcgctcccgccgcgcgtcgcgacccccgaactcacgccgcagttctatgggctggatcca
accgaggtgcgtccagccgatcaggcgggatttccttttgcgctcacggtcggcgagctc
gaccagcaactcaaacgcgtctattgcggcgggctcgggctcgattgtagcggcgtgcgc
gacgattcgatccggcgctggctattcaaccggatggagtccgaacttgtttgccctcag
ccgacgccgcaagagcgcgacgcactactgcgccgcctgctgacagtcgaaatgtgggag
cgtctcgtagcgtcccgccacggacatgcgaagcgcttctctctggaagggtgcgaaagc
cttgtgccgctacttgacgctttgatcgagagttcggccatcgacggcgttcagcagatc
ttcctgggcatgccccatcgcggacgtctcaacgcgctcgtcaacctgatggacttcccc
gttgcggagatgctcgcgtgtctcgaccacgaatccgacatcgctgccatgcaaaccgat
ctgccgtatcacctgggcggcgcggcgctcaagcggacggcacatggcgagattgcgctg
ctgctcgcacacaacccctcgcatctgcaaagcgtgtatcccgtcgtcagcggcatggcg
cgcgcatggcaggacgagcacctcgacgcggcgtgcgtgccagtcgtcgttcatggcgac
gccgcattcgccggccaggggatcgtgatggagacgctgaacatgacgcgcaagagcggc
tatacgctgggcggcaccattcatgtgatcgtcaataatcagattggcttcaccacgccc
aatccgatgagtgtgcatgacaactcgtattgcaccgacatcgcacgcatgatcgactcg
cctgtcattcacgtcaacgcagactacccggaagatgtcatccgcgccgcacggatcgcg
ttcgattaccggatgagatacgaagccgacgttgtgatcgatctgatcggttatcgccgt
ctcggccactcggagcacgacataccggcgatcacccagccgcgcgcacaggcgtctgtc
gcgctccatccgacggtgacggcgcgctatcacgcggcgatgggagccactgtgccactt
gccgaactgcgggcggatgcgcttcgcgtcctgcaggcagatgccgtcaaaagacgtgca
ccggcgcacgtgtcggatgcatcaggaaagggtgcagccaggtcgaaccgacctctttcg
ctcgagcgaatccgctccttgacggcggccatgacgcgggtgcccggcggcttccgtctg
catgatttcgtcgccagcctgattgagaaatggcagtcgacggtcgctttcgcggatcat
gctgtggactggtgttttgccgagaacatcgcttacgcgtccctgctggaagaggagttt
gacattcgcctgtccggcatggacgtgggtcgaggcacgttcatgcatcggcatgcggtg
tggcacgcacaggatgcgcataccgccgccgaaagcgtgcacgttccgctcaggcatatc
gccgccaggcagggtgcgttcgatattgtcaattcaccgctcaccgaagaagccgcgctc
ggcttcgaatacggctacagcgtgcagacgaacaagcggctaacggtctgggaggcgcag
ttcggcgatttcgtcaatggcgcacaggtcatcatcgatcagtacattgcggctggcgaa
tacaaatggggctatcagtccgctttgactgtccttctcccgcatggtcatgaaggtgtg
ggcccggaacattccagcggttatctcgggcgctttctgcagctgtgcgccggcgacaac
ctgcgtgtcgttgtgccgtccacctccgcgcaatggtttcacctgttgcgcgagcaggcg
agggcggagcctgcgcagccgctcgtcgtcatgtcgccgaagtcgcagcttcatggcaat
tgcgcgtcgcattcgcctctgagcgattttatcgacggatcgttcaacccgatcctgcca
gaccccggcatcgtggatccgcgcgtcgtgacccgggtcgttctttgcagcggaaagctc
ttctacgaactgcagagggcacgcgacgaatcgcgagatacatccacagcactggtccgc
gtcgagcagctctatccgtttccgcatgacgcgctggcgtccttattgagcgggttcgag
aagctcgaggaagtggtgtgggcccaggaggaggacaggaatcagggcgcatggcgcttc
gtgcgcgaggcactcgaacaggtgctgccgcgcggcagccggttgcgcgatgtatgccgg
accctgaccgcatcgggcgcgcacgcgtcgatacgcgcgcatcaaaaagaacagtgccgc
attgtggcttcggcgttatcacgcccgtcgcgttga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BPH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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