KEGG   Brachyspira pilosicoli P43/6/78: BPP43_06750
Entry
BPP43_06750       CDS       T02387                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bpip  Brachyspira pilosicoli P43/6/78
Pathway
bpip03410  Base excision repair
bpip03430  Mismatch repair
bpip03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BPP43_06750
   03430 Mismatch repair
    BPP43_06750
   03440 Homologous recombination
    BPP43_06750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpip03400]
    BPP43_06750
DNA repair and recombination proteins [BR:bpip03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BPP43_06750
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BPP43_06750
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BPP43_06750
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 DNA_ligase_aden aBig_2
Other DBs
NCBI-ProteinID: AGA66586
UniProt: A0A3B6VL30
Position
complement(1419438..1421609)
AA seq 723 aa
MQKIDIDNLNPIIKELLKLRGVVSKEDIFDFFFQDIYSLSNPFNIRDMNAFVDRLKEAIE
YNEKILIYGDKDADGVTAASIIYNTLKAVTKNVEAFVPNHEVGYGLSKDVIESYANSGVS
LIITVDCGISNVEEVEFAREHSIDIIVTDHHDIPEILPNAYLIFNPKLSNTGFVSKNFSG
CAVAFKLMQAFVFSYTKLYNKDIIILDYEIDKNTDKLKRIRALKSTNFVYSDDVFGFELV
NNDNAYKSIYLDYYEEFLSEDEVLEELASYMFEGENVVLVLTGGEIRLKKLLRLYEKYEL
YLPEYDNVYDLLQLGANYGGVNIKSVKTLDEFALLLKVNIYKYDNILYRDLIIKMEIFRR
MYYLSQKQLQNYIKRESILVLFGTVADVVPLIEENRAYIKCALAELEKPNHIRYNVILER
IKLLNTKVDTQAVSWRLAPFINAAGRMGKPEYALRLLTSETREEAFQLSEEVYNLNETRK
SLTESNFNIVCEYIKENNCMSYPIIIVKSDLIDRGLTGLIAGKVLSQYGKTAVILYESKE
DGVCTGSIRSRGDDNARDMLEYSSVYLDKFGGHKNAAGFTVSVNNFEKFAKKIIKYASEE
NFNTSKDEKTYDLELDFKDINMQFAEYLELFEPYGFANEEPVFFTNRVTINSIEKINKNN
KIHLKLQLQKNGSRANAIIWSSSEEECSKLEASNFINISYKIKINRFNGSKEVKIYIENY
EIN
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgcaaaaaattgacatagataatttgaatcctattataaaagagttgcttaaattaagg
ggagtagtttcaaaagaagatatttttgattttttctttcaagatatatattcgctttct
aatccatttaatattagggatatgaatgcttttgtagataggctaaaagaagctatagag
tataatgaaaaaatattgatatatggcgataaagatgctgacggtgttactgctgcttct
ataatatataatactcttaaggctgttacaaaaaatgttgaagcttttgttcctaatcat
gaagtgggatatgggctttcaaaagatgtcattgaaagttatgctaattctggggtgagt
ttaatcattacggttgattgcggtatatcgaatgttgaagaagttgagtttgcaagagaa
cattctatagatattatagtaacagaccatcatgatatacctgaaatacttccaaatgct
tacttaatatttaatcctaaactttcaaatactggttttgtttccaaaaacttttctggg
tgtgctgttgcatttaagcttatgcaggcatttgttttttcttataccaaactttataac
aaagatatcattatattagattatgagatagataaaaatactgataagttaaaaagaata
agagcattaaagtctactaattttgtttatagtgatgatgtatttggctttgagcttgta
aataatgataatgcttacaaatctatttatttagattattatgaagagtttttgtcggaa
gatgaagttttagaagagttagctagttatatgtttgagggggagaatgttgtattggtt
ttaactggcggagagattaggcttaaaaaacttcttagactatatgaaaagtatgagcta
tatttgcctgaatatgataatgtttatgatttacttcagttgggggctaattatggcgga
gttaatatcaaatcagtaaaaacattagatgagtttgccttgcttcttaaagttaatata
tataagtatgataatattctctatagagacttaataataaaaatggaaatttttagaaga
atgtattatttaagtcaaaagcaattgcaaaactatataaaaagagaatctatattagta
ttgtttggaacagttgccgatgttgtaccgcttattgaagagaatagggcttatataaaa
tgtgctttggcagaattggaaaagcctaatcatataaggtataatgtgatactagagaga
ataaaactattaaacactaaagttgatactcaggctgtaagctggagacttgcccctttt
attaatgctgcgggtagaatgggaaagcctgaatatgctttaaggcttttaacttctgaa
actagagaagaggcttttcaattgtctgaagaagtttataatttaaacgaaacaagaaaa
tctcttacagaaagcaattttaatatagtgtgcgaatatataaaagaaaataattgcatg
tcttatcctattataatagtaaagagtgatttaatagatagaggtttaacaggtcttata
gcgggtaaagttttaagtcaatatggaaagactgctgttatactttatgaatccaaagaa
gatggagtttgtacgggtagtattagaagcagaggtgatgacaatgctcgcgatatgctt
gagtattctagtgtttatttagataagtttggcgggcataagaatgctgctggttttact
gtgagtgtaaacaattttgaaaagtttgctaaaaaaattattaaatatgcttcggaagag
aattttaacacttcaaaagatgaaaagacttatgatttggaattagattttaaagatatt
aatatgcagtttgctgagtacttagagttatttgagccttatggttttgctaatgaagag
cctgtattttttacaaatagggttactataaactctatagaaaaaataaataaaaataat
aagattcatttaaaactgcaattacaaaaaaatggcagcagagctaatgctataatttgg
agttcatcagaagaagaatgctctaaattggaagcttcaaattttataaatatttcgtac
aagataaaaataaatagatttaatggcagcaaagaagtaaagatttatatagagaattat
gagataaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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