KEGG   Brachyspira pilosicoli P43/6/78: BPP43_11045
Entry
BPP43_11045       CDS       T02387                                 
Name
(GenBank) NAD-dependent DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
bpip  Brachyspira pilosicoli P43/6/78
Pathway
bpip03030  DNA replication
bpip03410  Base excision repair
bpip03420  Nucleotide excision repair
bpip03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bpip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BPP43_11045
   03410 Base excision repair
    BPP43_11045
   03420 Nucleotide excision repair
    BPP43_11045
   03430 Mismatch repair
    BPP43_11045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpip03032]
    BPP43_11045
   03400 DNA repair and recombination proteins [BR:bpip03400]
    BPP43_11045
Enzymes [BR:bpip01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BPP43_11045
DNA replication proteins [BR:bpip03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BPP43_11045
DNA repair and recombination proteins [BR:bpip03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BPP43_11045
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BPP43_11045
   MMR (mismatch excision repair)
    DNA ligase
     BPP43_11045
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BPP43_11045
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 PTCB-BRCT DNA_ligase_ZBD HHH RNA_ligase HHH_3
Other DBs
NCBI-ProteinID: AGA67369
UniProt: A0A3B6W0L0
Position
complement(2306427..2308418)
AA seq 663 aa
MNLEEARKKIEQLTATINYHNKLYYTDDNPEIEDYEYDKLFRELENIEREFPELKKDDSP
TNKVGGTILEKFEKFEHPIAMYSLSNVMNEEEFLEFDNRMQKELNTSKIKYTVENKFDGL
ALELIYEKGKLTVASTRGDGQVGENVTNNVKMMNNVPKSIKETKKLIVRGEALITKKDFE
ILNKEREELEEIPFANARNAASGGLRQLDSSESKKRRLKFFAYQIANYKDFDLTNEYKSM
EFLSELGFTVEGVHPNIDAKKVLETYYDIQEKRSKMDYEIDGLVIKVDDVKYQEKLGFLS
RAPRFAVAFKFKPEEKETILKNIEVQVGRTGALTPVAKLEPVQVGGVTVSNVTLHNPNEI
KSKDIRIGDTVVVIRSGDVIPKIVRVVLEKRPSDSKVFEFPKKCPVCGGETAVTDGDVIV
RCINEECSSKITRYIEYFVSKPAMNMERIGKEWIAVFTKSGLVKTPADLYKITRDDLFKF
ERMGEKLASYMLESIENSKNTTLKRFIYALGIRQVGETTADLLAKYFTSVENFKKATIDD
LQNIEGIGEISAKSIYDFLHNKKTLKLIDDLLDAGVNPVFEKLTTVESPLTGKNVVITGS
IEGFTRTSAKEAAERLGATVQSAVSKNTDILIVGEKAGSKLKKAQELGIQIMEADDFIKL
ANI
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgaacttagaagaagctagaaaaaaaatagaacaattaactgcaactattaactatcac
aataaactttactatacagatgataaccctgaaatagaagactatgaatatgataaacta
tttagagaattagaaaatattgagagagagtttccagagttaaaaaaagatgatagccct
actaacaaggttggaggcactatactagaaaagtttgagaaatttgaacaccctattgca
atgtactctctttctaatgttatgaatgaagaagagtttttggaattcgacaacagaatg
caaaaagaactcaatactagtaaaatcaaatatactgttgaaaataaatttgacggtctt
gctttagagttaatatacgaaaaaggaaaacttactgttgctagtactagaggcgacgga
caggttggagagaatgttaccaataatgtaaagatgatgaataatgttccaaaaagcata
aaagagacaaaaaaactcattgtacgtggagaggcactaataacaaaaaaagattttgaa
atcttaaacaaagagagagaagaactcgaagagataccttttgctaatgcaagaaatgca
gcatcaggaggattaagacaattagacagttctgaaagtaaaaaaagaagattaaaattc
tttgcttatcagattgctaattataaagatttcgatttaactaatgaatataaatcaatg
gagtttttatcagaattaggattcacagtagaaggcgttcacccaaatattgatgctaaa
aaagtattagaaacttattatgatatacaagaaaaaagaagcaaaatggattatgagatt
gacggacttgtaataaaagttgatgatgttaagtatcaggagaaattaggatttttatca
cgagcgccaaggtttgcggttgcgtttaagtttaagccagaagagaaagaaactatttta
aaaaacatagaagtacaagttggacgcactggggcattaacacctgttgctaaattagag
cctgttcaagttggaggggttaccgtttcaaatgttacgcttcataaccctaacgagata
aaatcaaaagatataagaataggagatactgttgtagttatacgttcgggagatgttata
ccaaaaattgtgagagtagtattagaaaaaagaccttcagacagcaaagtttttgagttt
cctaaaaaatgtcctgtttgtggaggagaaactgctgtaactgatggagatgtaattgta
agatgtattaatgaagaatgttcaagcaagattacaagatatatagaatattttgtttca
aagcctgctatgaatatggagagaataggtaaagagtggattgcagtatttacaaaaagc
ggacttgttaaaactccagctgacctctataaaataacaagagatgatttatttaagttt
gaaagaatgggagagaaattagcttcttatatgcttgaatctattgaaaacagtaaaaac
actactttaaaaagatttatatacgcattaggtattcgtcaggtgggagagactactgct
gacttgcttgctaaatattttacttcggtagagaatttcaaaaaagctactattgatgat
ttacaaaatattgagggcataggagaaatcagtgctaaaagtatttacgattttcttcat
aataaaaagacattgaaattgatagatgatttgcttgatgcaggggttaatcctgtattt
gaaaaacttacaactgtagaatcacctctcactggaaaaaatgttgtaataacaggctct
atagaaggctttacaaggacttcagcaaaagaggctgccgagagattaggtgcaactgtt
caatctgcagtatcaaaaaacacagatattttgattgtaggagaaaaagcaggaagcaaa
ttaaaaaaagctcaagaattaggcattcaaataatggaagccgatgattttataaagctt
gctaatatataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (30)   

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