KEGG   Brachyspira pilosicoli B2904: B2904_orf2223
Entry
B2904_orf2223     CDS       T02225                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bpj  Brachyspira pilosicoli B2904
Pathway
bpj03410  Base excision repair
bpj03430  Mismatch repair
bpj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    B2904_orf2223 (recJ)
   03430 Mismatch repair
    B2904_orf2223 (recJ)
   03440 Homologous recombination
    B2904_orf2223 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpj03400]
    B2904_orf2223 (recJ)
DNA repair and recombination proteins [BR:bpj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     B2904_orf2223 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     B2904_orf2223 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      B2904_orf2223 (recJ)
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 DNA_ligase_aden aBig_2
Other DBs
NCBI-ProteinID: AFR71551
UniProt: J9UK66
Position
complement(2277840..2280011)
AA seq 723 aa
MQKIDIDNLNPIIKELLKLRRVVSKEDIFDFFFQDIYSLSNPFNIRDMNAFVDRLKEAIE
YNEKILIYGDKDADGVTAASIIYNTLKAVTKNVEAFVPNHEVGYGLSKDVIESYANSGVS
LIITVDCGISNVEEVEFAREHSIDIIVTDHHDIPEILPNAYLIFNPKLSNTGFVSKNFSG
CAVAFKLMQAFVFSYTKLYNKDIIILDYEIDKNTDKLKRIRALKSTNFVYSDDVFGFELV
NNDNAYKSIYLDYYEEFLSEDEVLEELASYMFEGENVVLVLTGGEIRLKKLLRLYEKYEL
YLPEYDNVYDLLQLGANYGGVNIKSVKTLDEFALLLKVNIYKYDNILYRDLIIKMEIFRR
MYYLSQKQLQNYIKRESILVLFGTVADVVPLIEENRAYIKCALAELEKPNHIRYNVILER
IKLLNTKVDTQAVSWRLAPFINAAGRMGKPEYALRLLTSETREEAFQLSEEVYNLNETRK
SLTESNFNIVCEYIKENNCMSYPIIIVKSDLIDRGLTGLIAGKVLSQYGKTAVILYESKE
DGVCTGSIRSRGDDNARDMLEYSSVYLDKFGGHKNAAGFTVSVNNFEKFAKKIIKYASEE
NFNTSKDEKTYDLELDFKDINMQFAEYLELFEPYGFANEEPVFFTNRVTINSIEKINKNN
KIHLKLQLQKNGSRANAIIWSSSEEECSKLEASNFINISYKIKINRFNGSKEVKIYIENY
EIN
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgcaaaaaattgacatagataatttgaatcctattataaaagagttgcttaaattaagg
agagtagtttcaaaagaagatatttttgattttttctttcaagatatatattcgctttct
aatccatttaatattagggatatgaatgcttttgtagataggctaaaagaagctatagag
tataatgaaaaaatattgatatatggcgataaagatgctgacggtgttactgctgcttct
ataatatataatactcttaaggctgttacaaaaaatgttgaagcttttgttcctaatcat
gaagtgggatatgggctttcaaaagatgtcattgaaagttatgctaattctggggtgagt
ttaatcattacggttgattgcggtatatcgaatgttgaagaagttgagtttgcaagagag
cattctatagatattatagtaacagaccatcatgatatacctgaaatacttccaaatgct
tacttaatatttaatcctaaactttcaaatactggttttgtttccaaaaacttttctggg
tgtgctgttgcatttaagcttatgcaggcatttgttttttcttataccaaactttataac
aaagatatcattatattagattatgagatagataaaaatactgataagttaaagagaata
agagcattaaagtctactaattttgtttatagtgatgatgtatttggctttgagcttgta
aataatgataatgcttataaatctatttatttagattattatgaagagtttttgtcggaa
gatgaagttttagaagagttagccagttatatgtttgagggggagaatgttgtattggtt
ttaactggcggagagattaggcttaaaaaacttcttagactatatgaaaagtatgagcta
tatttgcctgaatatgataatgtttatgatttgcttcagttgggtgctaattatggcgga
gttaatatcaaatcagtaaaaacattagatgagtttgctttgcttcttaaagttaatata
tataagtatgataatattctctatagagacttaataataaaaatggaaatttttagaaga
atgtattatttaagtcaaaagcaattgcaaaactatataaaaagagaatctatattagta
ttgtttggaacagttgccgatgttgtaccgcttattgaagagaatagggcttatataaaa
tgtgctttggcagaattggaaaagcctaatcatataaggtataatgtgatactagagaga
ataaaactattaaacactaaagttgatactcaggctgtaagctggagacttgctcctttt
attaatgctgcgggtagaatgggaaagcctgaatatgctttaaggcttttaacttctgaa
actagagaagaggcttttcaactgtctgaagaagtttataatttaaacgaaacaagaaaa
tctcttacagaaagcaattttaatatagtgtgcgaatatataaaagaaaataattgcatg
tcttatcctattataatagtaaagagtgatttaatagatagaggtttaacagggcttata
gctggtaaggttttaagtcaatatgggaaaactgctgttatactttatgaatctaaagaa
gatggtgtttgtacgggaagtattagaagcagaggtgatgacaatgcacgcgatatgctt
gaatattccagtgtttatttagataagtttggcgggcataaaaatgctgctgggtttact
gtgagtgtaaacaattttgaaaagtttgctaaaaaaattattaaatatgcttcagaagag
aattttaacacttcaaaagatgaaaagacttatgatttggaattagattttaaagatatt
aatatgcagtttgctgagtacttagagttatttgagccttatggttttgctaatgaagag
cctgtattttttacaaatagggttactataaactctatagaaaaaataaataaaaataat
aagattcatttaaaactgcaattacaaaaaaatggcagcagagctaatgctataatttgg
agttcatcagaagaagaatgctctaaattggaagcttcaaattttataaatatttcgtac
aagataaaaataaatagatttaatggcagtaaagaagtaaagatttatatagagaattat
gagataaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system