KEGG   Burkholderia pseudomallei 1106a: BURPS1106A_3888
Entry
BURPS1106A_3888   CDS       T00480                                 
Name
(GenBank) conserved hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bpl  Burkholderia pseudomallei 1106a
Pathway
bpl03420  Nucleotide excision repair
bpl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bpl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BURPS1106A_3888
   03430 Mismatch repair
    BURPS1106A_3888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpl03400]
    BURPS1106A_3888
Enzymes [BR:bpl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BURPS1106A_3888
DNA repair and recombination proteins [BR:bpl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BURPS1106A_3888
   MMR (mismatch excision repair)
    Other MMR factors
     BURPS1106A_3888
SSDB
Motif
Pfam: UvrD-helicase AAA_19 AAA_30 UvrD_C UvrD_C_2 AAA_11 LEA_5
Other DBs
NCBI-ProteinID: ABN91741
UniProt: A3P0I8
Position
I:3793511..3795406
AA seq 631 aa
MTLRASQPDTPADLELRACLDERPQRSFVMVAGAGSGKTTSLVKALTHLAQTRRRELKMR
GQRIACITYTEVATKEISGDVGDDGLFHVSTIHSFMWSVVRPFQIDLKTWVISRIHEQIA
EAREHYNRPRTRPATRQRLEREIARHERHLEEVAHRTHFSYGAGRDFARGVLGHPDVIAV
AVELIEQSQLLRDLIASHYPVLFVDESQDTRADVVAAFRLIAETTPLEFCLGFFGDPMQK
IYADGAGAIDAPATWSQITKPENFRCPQQVLRIVNGIRRAGDGLEQTRGRMTRVDDVLIP
VAGTARLFLLLADERRSAKLSRVREWLRRTNNDELWVSEDRAADVRTLVVVHRMAASRLN
FPNLYAALNDNSPQNFKEGLKDGSAWPLRPFLTYLLPLAMAVRDRRDFDAMTLLRSQCLL
LSSVGLAGNGAPEVLRNLRAATEGLATLMHSNDATLRTVLIFASNTGLLQLDEAWSKYLD
DDAEALAADDDPEVPSIIAFLNCQVSELRGYRHYLEDLSPFATQQGVKGAEFERVLVLID
DDEGRGQRLFSYEKYFNIAPLSETDQENIDAGDDNVIDRTRRLFYVCCSRAKRDLAVVMF
VGDLAAARGKIEESGIFMPDDIVDEAALELD
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgacactccgtgctagccaacctgatacaccggcagatctggaactgagagcgtgtctg
gatgaacgtcctcaacgaagctttgtcatggtcgcaggagctggatcaggaaagacgacg
tcgctcgtcaaagccctcactcatcttgcgcagacacggcgacgcgaactcaagatgcgc
ggtcagcggattgcctgtattacgtacaccgaggttgcgaccaaggaaattagcggagat
gtcggagatgacgggttgttccatgtctcgaccatacatagctttatgtggtcggttgta
cgcccgttccaaatcgatctcaagacgtgggtgatctcgcgcattcacgaacagatcgct
gaggcgcgagaacactacaacagaccgcgcacacgccccgccactcggcaacgtttggag
agagaaattgctcgccatgagcgccacctagaagaggtagcacaccgaacgcacttttcg
tatggggcgggacgcgacttcgcgcgaggtgtcttgggccatccagacgtcattgcggtt
gcggtggaattaatcgagcaaagccaattactacgcgacctcatcgccagtcattatccg
gttctctttgtcgacgagagccaagatacccgtgcggatgttgtggccgcatttcgcctc
atcgccgaaactactcctcttgagttttgcctaggcttctttggtgacccaatgcagaag
atctatgccgatggcgctggcgcgatagatgcccctgctacgtggagccaaatcaccaag
ccggagaacttccggtgcccgcaacaagtactcaggatagtgaatggaatccgcagagcc
ggtgatggattggagcagacgcgcggcaggatgacgcgcgttgacgatgttttgatccca
gtcgccgggactgcgagattgttcctactgctggcagatgagcgtcggtcggcgaagcta
tcaagggttcgcgaatggctccgacggacgaacaatgatgagctctgggttagcgaggat
cgcgccgcagacgttcgaacattggttgtcgttcatcgtatggccgcgtcgcgcctaaac
tttcccaacttgtatgcggccttgaacgacaactctccgcagaatttcaaagagggtttg
aaagatggcagtgcgtggccactccgtccattcttgacatacctactaccgctagcaatg
gctgtccgagatcgccgcgactttgacgcaatgacgttgttgcgttcacagtgtttgctg
ttgagctcggtgggtctggctggcaatggtgcgcccgaagtactaagaaatctacgagcg
gccaccgagggccttgcaacgctcatgcactcaaacgacgcgacgctcaggaccgtgctg
attttcgcatccaacacggggttgctgcagcttgacgaggcctggtccaagtatcttgat
gacgatgctgaggcccttgctgccgatgacgatcccgaagtgccgtccattatcgccttc
ctgaactgccaagttagcgagctgagaggatatcgccactacctcgaggacctttcccca
tttgccactcagcaaggtgtcaagggcgctgaattcgaacgtgtccttgtgttgatcgac
gacgacgaaggaagaggccagcgcctcttctcgtacgaaaaatatttcaacattgctccg
ctttcggagaccgatcaagagaacatcgatgcaggcgacgacaatgtgatcgatcgaacc
cggcgcctcttttatgtctgctgctcacgcgcgaaacgggatctggcggttgtaatgttc
gttggcgatctcgcggccgcccgagggaagatagaggaaagcgggatttttatgccggac
gacatcgttgatgaagccgccctggaactcgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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