KEGG   Burkholderia plantarii ATCC 43733: bpln_1g10260
Entry
bpln_1g10260      CDS       T04139                                 
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
bpla  Burkholderia plantarii ATCC 43733
Pathway
bpla03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    bpln_1g10260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpla03400]
    bpln_1g10260
Enzymes [BR:bpla01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     bpln_1g10260
DNA repair and recombination proteins [BR:bpla03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     bpln_1g10260
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 PDDEXK_1 DUF374
Other DBs
NCBI-ProteinID: ALK29848
Position
1:1195060..1198821
AA seq 1253 aa
MTNVSVSAARAPVELDVFACALDGVNQIEASAGTGKTWNICALYVRLLLEHDLEADQILV
VTFTKAATAELHERIRARLAQLAHVLDTGDDGGDPFVAKLFETTLGAQGGIDVEVAGKRI
RRALRKFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDASLRFELAADFWYSRVEP
VAAAYPAFAAWLVEHRAGPDALDAQLARRLKKPLAELRFDGLTPLHDTGGPDADAIARAR
HDEAAALWHGGRARIAALLDDAQPSLNQRSHKPEAVADALAAWATYFGEAEMADGAADHS
AAPAPLPKAALKLTRGVLEKATKKGGTTPEHPFFEAAEVLDAALAAAEDAQRGRWLSLIA
AWLAEAPARLVEKKRTRRVVSFDDLLANLHHALATHPWLADTLRRRYPAALIDEFQDTDP
LQFEIFDTIFAPDGPLFLVGDPKQAIYSFRAADLHTYLAARASARSCYTLAVNQRSTPAI
VDACNRVFTANPHAFVLDDLDYPPVRAGTRQRAPFVDGTDPRAGAGDFRIWTLPEGDAML
AKRDAQWQAAQSCAAEIARLMRGARAGAVRLGETPLAPSDIAVLVQTHRQGSIVKRVLAA
WGIGSVELAQASVFATPDAEQLERVLAAVDAPGDLRRLRAALATDWFGLDAAALWRLEQG
DAPAGAAAGADAMSWVERFSRYRLLWRERGFAVMWRTLARELRIAERLLDGAGGERRVTD
VNHLAELTQARASAQPGIAPTLRWLAAQRRAGGGEDAQLRLESDRNLVQIVTVHKSKGLE
YAVVFCPFLNDGRLHEPREEALPDAREYHDETGAAVLHYGCDEAAAEMAAAQARREQAAE
RARLVYVALTRAVYRCYLVAGVYQAARSTREARRSVLNWLVAGGGHDFDAWLDTPPEADE
LAASWRRLADGPISIEPLPAVPAREPLAAGHDADALGGARHAARFLRDAWRIASFSSLTA
SLAREQEGVAVLPDEALRPDHDALAAAVDPMPRLDDGAAGTGAPAEPDGDDIVAFPRGAA
AGECLHLLFELSAFDRADSWPEAARRALHERPVEAEPTLGERLPAMMTRLVADVVATELV
PGLRLDALDPRRRLNEMAFLFPAASLDFLALRELLSAHGYPDVALESGTLAGFLKGFIDM
IVEHDGRFWIVDWKSNHLGATPDAYGPAALDAAMADHAYHLQALLYTVALHRYLRVRLPG
YDYDTHMAGYLYLFVRGVRPDWRSGGAPAGVHAKRASRELVDALDALMRKERG
NT seq 3762 nt   +upstreamnt  +downstreamnt
atgacgaacgtctccgtttccgccgcccgggcgcccgtcgaactcgacgtgttcgcctgc
gcgctcgacggcgtgaaccagatcgaggcgtcggccggtaccggcaagacctggaacatc
tgcgcgctctacgtgcggctgctgctcgaacacgatctcgaggccgaccagatcctcgtc
gtcacgttcaccaaggcggccacggccgagctgcacgagcgcattcgcgctcgcctcgcg
cagctcgcgcacgtgctcgacaccggcgacgacggcggcgatccgtttgtcgcgaagctg
ttcgagaccacgctcggggcgcagggcggcatcgacgtggaggtggccgggaagcggatc
cgccgcgcgctgcgcaagttcgaccaggcggcgatccacaccatccacgcgttctgccag
cgcgcgctgcaggaggcgccgttcgccgcggcgatgccgttcgcgttcgagatggaggcc
gacgacgcgtcgctgcgcttcgaactcgcggccgacttctggtactcgcgcgtcgagccc
gtggcggccgcgtatccggcgttcgcggcgtggctcgtggagcatcgcgccgggccggac
gcgctcgatgcgcagctcgcgcggcgcctgaagaagccgctcgccgagctgcgtttcgac
ggcctgacgccgctgcacgacacgggcgggcccgatgccgacgccatcgcgcgcgcgcgt
catgacgaggccgccgcgctctggcatggcgggcgcgcgcgcatcgccgcgctgctggac
gacgcgcagccgtcgttgaaccagcgctcgcacaagcccgaggcggtggccgacgcgctg
gccgcgtgggccacctatttcggtgaggccgagatggcggacggcgccgcggaccactcg
gccgcccccgcgccgctgccgaaggcggcactcaagctcacgcgcggcgtactcgagaag
gcgacgaagaagggcggcaccacgcccgagcatccgttcttcgaggcggccgaggtgctc
gacgcggcgctggccgcggccgaggacgcgcagcgcgggcgctggctctcgctgatcgcc
gcgtggctggccgaggcgccggcgcggctcgtcgagaagaagcgcacgcgccgcgtggtg
tcgttcgacgatctgctcgcgaacctccatcacgcgctggccacgcatccgtggctggcc
gacacgctgcggcgccgctatccggccgcgctgatcgacgagttccaggacaccgatccg
ctgcagttcgagatcttcgacacgatcttcgcgccggacggcccgctgttcctggtgggc
gacccgaagcaggcgatctacagcttccgcgcggccgacctgcatacctatctggccgcg
cgcgcgagcgcgcgctcgtgctacacgctggcggtgaaccagcgctcgacgccggccatt
gtcgatgcctgcaaccgcgtgttcacggcgaacccgcatgcgttcgtgcttgacgatctc
gactacccgccggtgcgcgccggcacgcgccagcgcgcgccgttcgtcgacggcaccgat
ccgcgcgcgggcgcgggcgacttccggatctggacgctgcccgagggcgacgcgatgctg
gccaagcgcgacgcgcaatggcaggccgcgcagtcctgcgcggccgagatcgcgcggctg
atgcgcggcgcgcgcgccggcgcggtgcggctcggcgagacgccgctcgcgccgtccgac
atcgccgtgctggtgcagacgcatcggcagggcagcatcgtcaagcgcgtgctggccgcc
tggggaatcggcagcgtcgagctggcgcaggcgtcggtgttcgcgacgccggacgccgag
caactcgaacgcgtgctggccgcggtcgacgcgccgggcgacctgcgccggctgcgcgcg
gcgctcgccaccgactggttcgggctcgacgccgcggcgctgtggcggctcgaacagggc
gacgcgcccgccggcgcggcggccggggccgacgcgatgagctgggtcgagcgcttctcg
cgctaccggctgctgtggcgcgaacgcggcttcgcggtgatgtggcgcacgctcgcgcgc
gagctgcggatcgccgagcggctgcttgacggcgccggcggcgagcggcgcgtgaccgac
gtgaaccatctcgcggagctcacgcaggcgcgcgcgtcggcgcagcccggcatcgcgccg
acgctgcgctggctcgccgcgcagcgtcgcgcgggcggcggcgaggatgcgcagctgcgg
ctcgaatcggaccgcaacctggtgcagatcgtcaccgttcacaagtcgaaggggctcgaa
tacgcggtggtgttctgcccgttcctcaacgacggccggctccacgagccgcgcgaggag
gcgctgcccgacgcgcgcgagtatcacgacgagaccggcgcggcggtgctgcactacggc
tgcgacgaggccgccgccgagatggccgccgcgcaggcgcgccgcgagcaggccgccgag
cgcgcgcggctcgtctacgtggcgctgacgcgcgccgtctatcgctgctatctggtggcg
ggcgtctaccaggcggcgaggtcgaccagggaagcgcggcgcagcgtgctgaactggctc
gtggccggcggcggccacgatttcgacgcgtggctcgacacgccgccggaggccgatgaa
cttgccgcgagctggcgccggctcgccgacggcccgatctcgatcgagccgctgccggcg
gtgccggcccgcgagccgctcgcggccggccacgacgccgatgcgctgggcggcgcgcgg
catgccgcgcggttcctgcgcgacgcatggcggatcgcgagcttcagctcgctcaccgcc
tcgctcgcgcgcgagcaggagggtgtggcggtgctgcccgacgaggcactgcggcccgat
cacgacgcgctcgcggcggccgtcgatccgatgccgcgcctcgacgacggcgcggccggc
accggcgcgcccgccgagcccgacggcgacgacatcgtcgcgttcccgcgcggcgcggcg
gcgggcgagtgcctgcacctgctgttcgagctgagcgcgttcgaccgcgccgacagctgg
cccgaggcggcccggcgcgcgctgcacgagcggcccgtggaggccgagccgacgctcggc
gagcggctgccggcgatgatgacgcggctggtggccgacgtggtggcgaccgagctggtg
ccgggcctgcggctcgacgcgctcgacccgcgcaggcgcctgaacgagatggcgttcctg
ttcccggccgcgtcgctcgatttcctcgcgctgcgcgagctgctgagcgcgcacggctat
cccgacgtcgcgctcgaatcgggcacgctcgccggcttcctgaagggcttcatcgacatg
atcgtcgagcacgatggccgcttctggatcgtcgactggaaatcgaaccatctcggcgcg
acgcccgatgcctacgggccagccgcgctcgacgcggcgatggccgatcatgcctaccat
ctgcaggcgctgctctacacggtggcgctgcatcgctacctgcgcgtgcggctgcccggc
tacgactacgacacgcacatggcgggctacctttacctgttcgtgcgcggcgtgcggccc
gactggcgcagcggcggcgcgcccgccggcgttcacgcgaagcgcgcctcgcgcgaactc
gtcgacgcgctcgacgccctgatgcgcaaggagcgcggatga

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