KEGG   Burkholderia pseudomallei 1710b: BURPS1710b_2607
Entry
BURPS1710b_2607   CDS       T00289                                 
Name
(GenBank) phage SPO1 DNA polymerase domain protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
bpm  Burkholderia pseudomallei 1710b
Pathway
bpm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bpm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BURPS1710b_2607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpm03400]
    BURPS1710b_2607
Enzymes [BR:bpm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     BURPS1710b_2607
DNA repair and recombination proteins [BR:bpm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BURPS1710b_2607
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ABA50346
UniProt: Q3JR03
Position
I:complement(2891156..2892562)
AA seq 468 aa
MAWTEAALEELGLAPAWVRRGAARAADVNEAAAHAAGEAAVAAVARGAQPASPDASREPA
RRIARDGGRDGGRDGGRDGGQNGGQNGGQNGASGDAGSASPNDAAHAMARVAGAEASAAA
AVADERAALARQAGDGRGQTRQAAAESGARAAADAPAPAAAPASRTRDATIARGASPDEP
GVAGVVGVADEPSVAGGARRARTSGGGADVPASALDWTDAAEATRPAAAPAPAALTGGDA
GAAASDEDMSWFDLEPVHEPVLPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKR
TNTVFGVGDEHADWMLVGEAPGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANV
IKCRPPGNRNPEPDEVARCEPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIASMRGRV
HQYEGVPVIVTYHPAYLLRSLQDKAKAWSDLCLANDTYRSAAPAADPP
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggcatggactgaagcggcgctcgaagaactggggctcgcgcccgcgtgggtgcggcgc
ggcgcggcgcgcgctgcggacgtgaacgaggcggccgcgcacgcggccggagaagccgcg
gtcgcggcggttgcgcgaggagcgcagccggcgtcgccggatgcgtcgcgcgagccggcg
cgtcggatcgcgcgcgatggtgggcgcgacggcgggcgcgacggcgggcgcgacggcggg
caaaacggcgggcaaaacggcgggcaaaacggcgcgagtggcgacgcgggatcggcgtcg
ccgaacgacgcggcgcatgcgatggcgcgtgtcgcgggcgcggaagcgagcgcagccgcc
gccgtcgccgacgaacgcgcggcgcttgcgcggcaggccggcgacgggcgcggacagacg
cggcaagcggcggccgaatccggcgcgcgggcggcggcggatgcgcccgcgccggccgcg
gcgcccgcatcgcggacgcgggatgcgacgattgcgcgcggggcttcgccggacgagccg
ggcgtggcaggcgtggtgggcgtggcggacgagccgagcgtggcgggcggcgcacgccgc
gcgcggacgagcggcggcggcgcggacgtgccggcgagcgcgcttgactggacggatgcg
gccgaggcaacgcgtccggcggcggcgcccgcgccggccgcgctcaccggtggcgatgcc
ggcgcggcggcgtccgacgaggacatgtcgtggttcgatctcgaaccggtgcacgagccc
gtgctgccggacgttgccgcacggcccgccgccactacgccgtccgtcgccgagctcggc
tgggacgaactgcgcgcgcgcgtcgccgactgcgcgcgctgccgcctctgcgaaaagcgc
acgaacacggtgttcggtgtcggtgacgagcacgccgactggatgctcgtcggcgaggcg
cccggcgagaacgaggacaagcaaggcgagccgttcgtcggccaggcgggcaagctgctc
gacaacatgctgcgcgcgctggcgctcaagcgcggcgagaacgtctacatcgcgaacgtg
atcaagtgccggccgcccggcaaccgcaatccggagcccgacgaggtcgcgcgctgcgag
ccgtatctgcagcggcaggtcgcgctcgtgaagccgaagctgatcgtcgcgctcggccgc
ttcgccgcgcagacgctgctcaagacggacggaagcatcgcttcgatgcgcgggcgcgtg
catcagtacgaaggcgtgcccgtgatcgtcacgtaccatccggcgtatctgctgcgcagc
ctgcaggacaaggcgaaggcctggtccgatctgtgtttggcgaacgatacctaccggagt
gccgcgcccgccgccgatccgccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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