KEGG   Burkholderia pseudomallei 1710b: BURPS1710b_A2090
Entry
BURPS1710b_A2090  CDS       T00289                                 
Symbol
icmF3
Name
(GenBank) putative membrane protein
  KO
K11891  type VI secretion system protein ImpL
Organism
bpm  Burkholderia pseudomallei 1710b
Pathway
bpm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bpm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BURPS1710b_A2090 (icmF3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bpm02044]
    BURPS1710b_A2090 (icmF3)
Secretion system [BR:bpm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BURPS1710b_A2090 (icmF3)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C AAA_16 HTH_WhiA
Other DBs
NCBI-ProteinID: ABA52256
UniProt: Q3JGR2
Position
II:2545077..2548391
AA seq 1104 aa
MSPRQVKVAPKAKQLDFVDKHLRTLDQQLKERWRKEPRGRWKRWVGALTREHRTMLPWYL
VLGSEGSGKSSLVAKAVSVSGSLQDRVLGSDATYGRGDDLNFRITREAVWFDVGGRWSLR
AGADEAEFDAWRKLLRGMRRLRRGAPISGVVLCVDGLEMIDAPLDARKRLADSVRARLEE
MREAFGQQVQVYVALNGLDRLDGAVSTLSLLEASKWVKGVGFSLPDDGAHADAARADASW
QHALQGLQQRVQQQVLYSAPAATEVSMNHAQLRFVETLSRLQKALVAWLHVALAPGEPHT
AARLRGVWLGSMAELAEPHPAGAGGVGSAELPVPSRPLSELWTPLIRQVALERDAVRPSG
PKSWRGRLGEALRWGAVPLVALSLLLWFGWGYVTERDYLDGVWAQFTEAKRLAQAEASYG
NDGGSTLIEIANQMRYAQLQAEDAAQGMATPYFEHGLVAETARETYYRHLQKMLMPELYN
EVRRTLVSQVDGSPGDIYQTLKVYLMLCRPARRSADDVVRWLDGRWDALSGGQYSDDDRR
SLLAHVRTLMSLKEVPATPEDANLVRSARAKAAQIPLVTRVLQHIHAQGLPQQVNDISLS
RAAGFEASMSLRMRSNVPSTDTAVSGWFTRAGYTDVFLPRLQKSARAMLEEESWVLRDET
LSGNSFQIDGLVQKLADSARNQFLQDYISAWQNFLNDVTVRGVTGLDDASQLAAAMMEAQ
SPLANLLRFAARETTLTGASDEGNIDSWIDRQKYRFEKGRRQVVGELSGQHYRTVLLPEH
VVEEHFQAIRQLAAQLNRNNTIANNPLSRLFEPLYRQLGLVNGALQAGQVLPAQYDAFSR
LKETAARQPEPVRGIMLDLVSSGSTMTTRESGALLNRGAAGATKMVCDQGFTGRYPMRRG
AQADAGVEDFERLFSAQGLMATYFRDHLAAYVDTSAKPWQALRSNGGPNGMVSQSVLNSY
ETAERIRGAMLDDSGHLRVSTVLRFIDMDSQLSEAQLSVAGQTVRFAHGVTSPHRVDWTN
QNTQLAIKLQLKSVDGRMTTLQFDGPWALFRFFDAGQAVGGTGTADRRERLYQTSLGTVR
IEWQALTLPSPIWSGILQSFRCPS
NT seq 3315 nt   +upstreamnt  +downstreamnt
atgagcccgcggcaggtgaaggtcgcgccgaaggccaagcagctcgatttcgtcgacaag
catctgcgcaccctcgaccagcagttgaaggagcgctggcgcaaggagccgcgcggccgc
tggaagcgctgggtcggcgcgctcacgcgcgagcatcgcacgatgctgccgtggtatctg
gtgctcggctccgagggtagcggcaagtcgagcctcgtcgcgaaggcggtgagcgtgtcc
ggctcgctgcaggaccgggtgctcggctcggacgcgacctacgggcgcggcgacgacttg
aacttccgcatcacgcgcgaggcggtgtggttcgacgtcggcggccgctggagcctgcgc
gcgggcgcggacgaggccgagttcgacgcgtggcgcaagctgctgcgcgggatgaggcgg
ctgcgcaggggcgcgccgatcagcggcgtcgtgctgtgcgtcgacggcctcgagatgatc
gatgcgccgctcgacgcgcgcaagcggctggccgattcggtgcgcgcgcggctcgaggag
atgcgcgaggcgttcggccagcaggtgcaggtgtacgtcgcgctgaacgggctcgaccgg
ctcgacggcgcggtctcgacgctgtcgctgctcgaggcgtcgaagtgggtcaagggcgtg
ggcttcagcctgcccgacgacggcgcgcacgccgacgccgcgcgcgcggacgcgagctgg
cagcacgcgctgcaagggctgcagcagcgggtccagcagcaggtgctgtattcggcgccg
gcggcgaccgaggtgtcgatgaaccacgcgcagttgcgcttcgtcgagacgctcagccgc
ctgcagaaggcgctcgtcgcgtggctgcacgtcgcgctcgcgccgggcgagccgcacacg
gccgcgcggctgcgcggggtgtggctgggctcgatggccgagctcgcggagccgcatccg
gcgggcgcgggcggcgtcggctcggcggagctgcccgtgccgtcgcgcccgctcagcgag
ctgtggacgccgctcatccggcaggtggcgctcgagcgcgacgcggtgcgcccgagcggg
ccgaagtcgtggcgcgggcgcctgggcgaggcgctgcgctggggcgcggtgcccctcgtc
gcgttgagcctgctgctgtggttcggctggggctacgtcaccgagcgcgactatctggac
ggcgtctgggcgcagttcaccgaggccaagcggctcgcgcaggccgaggcgtcctacggc
aacgacggcggctcgacgctcatcgagatcgcgaatcagatgcgctatgcgcaactgcag
gccgaggacgccgcgcagggcatggcgacgccgtacttcgagcacgggctcgtcgcggaa
accgcgcgcgagacctactaccggcacttgcagaagatgctgatgccggagctgtacaac
gaggtgcggcgcacgctcgtgtcgcaggtcgacggcagcccgggcgacatctaccagacg
ctgaaggtctacctgatgctctgccgccccgcgcggcgctcggcggacgacgtcgtgcgc
tggctcgacggccgctgggacgcgctctcgggcgggcagtactcggacgacgaccgccgc
tcgctgctcgcgcacgtgcgcacgctgatgtcgctgaaggaggtgccggccacgccggag
gacgcgaatctcgtgcgctcggcgcgcgcgaaagccgcgcagatcccgctcgtcacgcgc
gtgctgcagcacatccacgcgcaggggctgccgcagcaggtcaacgacatctcgctgtcg
cgcgcggcgggcttcgaggcgtcgatgagcctgcgcatgcgcagcaacgtgccgtcgacc
gacaccgcggtgtcgggctggttcacgcgcgcgggctacacggacgtgttcctgccgcgc
ctgcagaagagcgcgcgcgcgatgctcgaggaggagagctgggtgctgcgcgacgagacg
ctgtcgggcaacagcttccagatcgacggactcgtgcagaagctcgccgattcggcgcgc
aaccagttcctgcaggactacatctccgcgtggcagaacttcctgaacgacgtgacggtg
cgcggcgtgacgggcctggacgatgcgtcgcagctcgccgcggcgatgatggaggcgcaa
tcgccgctcgcgaacctgctgcgcttcgccgcgcgcgagacgacgctcacgggcgcgagc
gacgaaggcaacatcgacagctggatcgatcgccagaagtaccgcttcgagaaggggcgg
cggcaggtcgtcggcgagctgagcgggcagcattaccgcacggtgctgctgccggagcac
gtggtcgaggagcacttccaggcgatccgccagctcgccgcgcaactgaaccgcaacaac
acgatcgcgaacaacccgctgtcgcggctgttcgagccgctgtaccggcagctcgggctc
gtcaacggcgcgctgcaggcgggccaggtgctgcccgcgcagtacgacgcgttctcgcgg
ctgaaggagacggccgcgcgccagccggagccggtgcgcgggatcatgctcgacctcgtg
agcagcggcagcacgatgacgacgcgcgaatcgggcgcgctgctcaaccggggcgcggcg
ggcgcgacgaagatggtctgcgatcagggcttcacgggccgctatccgatgcgccgcggc
gcgcaggcggatgcgggcgtggaggacttcgagcggctgttcagcgcgcaggggctgatg
gcgacgtacttccgcgatcacctcgccgcatatgtggacacatcggccaagccgtggcag
gcgctgcgctcgaacggcgggccgaacgggatggtgagccagtcggtgctgaactcgtac
gagacggccgagcgcatccgcggcgcgatgctcgacgattcgggacacctgcgcgtgtcg
accgtgctgcgtttcatcgacatggattcgcagttgtccgaagcgcaactgagcgtggcc
gggcagacggtgcgcttcgcgcacggcgtgacctcgccgcaccgggtggactggaccaac
cagaacacgcagctcgcgatcaagctgcagctcaaatcggtggacggccggatgacgacg
ctgcagttcgacgggccgtgggcgctgttccgcttcttcgacgcggggcaggcggtgggc
ggcacgggcactgcggaccggcgcgagcggctgtatcagacgagcctcggcacggtgcgc
atcgaatggcaggcgctcacgctgccgtcgccgatatggtcgggcatcctgcagtcgttc
aggtgtccgtcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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