KEGG   Candidatus Blochmannia pennsylvanicus: BPEN_412
Entry
BPEN_412          CDS       T00272                                 
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
bpn  Candidatus Blochmannia pennsylvanicus
Pathway
bpn03030  DNA replication
bpn03430  Mismatch repair
bpn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BPEN_412 (holB)
   03430 Mismatch repair
    BPEN_412 (holB)
   03440 Homologous recombination
    BPEN_412 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpn03032]
    BPEN_412 (holB)
   03400 DNA repair and recombination proteins [BR:bpn03400]
    BPEN_412 (holB)
Enzymes [BR:bpn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BPEN_412 (holB)
DNA replication proteins [BR:bpn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BPEN_412 (holB)
DNA repair and recombination proteins [BR:bpn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BPEN_412 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNApol3-delta_C HolB_lid
Other DBs
NCBI-ProteinID: AAZ41036
UniProt: Q492Q7
Position
complement(488141..489142)
AA seq 333 aa
MRWYPWLDSTYNQILNAYRQDRGHHALLLNSKRNNGENTLIYAIARWLICSHPDANQCCN
ICYDCRLMNVGHHPDYYEISPENNTQTIGVDTIRACINSLHKYAYQSKVKIIYIEYVECL
TDQAVNVLLKTLDEPPTNTYFFFKTRDYMRISLTLLSRCMRWPIISPKESIGLQWLMKNR
EEINDILLAQCALRLCDGSPIEAEDMFKLGLWKQRLELCKCINYVIANGDFLKLVPFLNI
CKNDIYLYWFITVLVDALKWKQGIKKRFLINLDQVDLITVITVHWGIVSLSRQLQQWLVL
LRYFQEFTNIDRELLLTYRLLNWQQDIVESCLH
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgagatggtatccttggctagatagtacttataatcaaatattaaatgcttatcgacaa
gatagaggacatcatgctttacttttaaatagtaaacgaaacaatggtgaaaatacttta
atttatgctattgcacgttggttaatttgttctcatcctgacgcaaatcaatgttgcaat
atttgttatgattgtagattaatgaacgtaggacatcatccagattattacgaaataagt
cctgaaaataatactcaaactataggtgttgatactatccgtgcttgtattaattctcta
cacaaatatgcataccaaagtaaagtaaaaattatatatatagaatatgtggaatgttta
acggatcaggctgttaatgtattgttaaaaacacttgatgaaccaccaacaaatacttat
tttttttttaaaactcgagattatatgagaatatcattaacgttgttgagtcggtgtatg
cgatggcctattatatctcctaaagaatcgattggattacagtggttaatgaaaaataga
gaagagataaatgatattttgttggcgcagtgtgcattacgtttgtgtgatggatctcct
atagaagctgaagatatgtttaaattaggtttatggaaacaacgattagaattgtgcaaa
tgtataaattatgtcattgcaaacggggattttttaaaacttgtgccatttttaaatatt
tgtaagaatgatatatatttgtattggtttataactgtacttgtagatgcattaaaatgg
aagcaagggataaaaaaaagatttttaataaatttagatcaagtagacttgattactgtt
attacagttcattggggtattgtatctttaagtcgtcagttacaacaatggttggtgctg
ttacgttattttcaagaatttactaatattgatcgcgaattattattgacttatcgatta
ttaaattggcaacaagatattgttgaatcttgtttgcattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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