KEGG   Brachyspira pilosicoli 95/1000: BP951000_1323
Entry
BP951000_1323     CDS       T01278                                 
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bpo  Brachyspira pilosicoli 95/1000
Pathway
bpo03420  Nucleotide excision repair
bpo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bpo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BP951000_1323 (pcrA)
   03430 Mismatch repair
    BP951000_1323 (pcrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpo03400]
    BP951000_1323 (pcrA)
Enzymes [BR:bpo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BP951000_1323 (pcrA)
DNA repair and recombination proteins [BR:bpo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BP951000_1323 (pcrA)
   MMR (mismatch excision repair)
    Other MMR factors
     BP951000_1323 (pcrA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_12 AAA_11 AAA_22 AAA_30 Terminase_6N YflT DUF3253
Other DBs
NCBI-ProteinID: ADK31311
UniProt: D8IDT8
Position
complement(1451067..1453067)
AA seq 666 aa
MDNNKQNDLLNGLNENQKEGVLHIDSPLLLLAGAGSGKTLVITKKIAYLITEKHIRPENI
MAVTFTNKAANEMKERVCSMLPEIKPFRLFIRTFHSACLRILKDNAQYLNYREDFLILDE
GDRLSVIKKIMKEENTPKSIKPKDVSRYISAKKNEMRYDIGFEEEYYKKVYDKYKEYEVK
ENVMDFDDLILNTIKLFEKEKNILEFYQKRFKYILVDEFQDTNLQQYKLIKMLTQKNNNK
ETDNQLTVVGDDDQSIYAFRGANVSNILNFENDFENTKIIRLEENYRCPKNVVEVALNVI
KNNSHRHTKNVFSNKKSDYKIENWICYTDYEEAKSVANEIELLFDEGFEAKDIVILFRTN
SQSRAYEKELMAHSINYKIVGGVGFYERAEIKDSISFLRLLTGFNDNFSIRRTINTPTRG
IGEKTFAQFEAFADKKNLTLYDAIDIIEESNISKKALNSIKEYKNILEKYSKKTEEDPQH
IEGVFFEFLKEIDYFSIFKSDGNIRIATAEDNIKELFNAYYSYLNYNYENPESSLNIRGF
LEETTLYKDNSNEDKEDAITLMTVHNAKGLEFEVVFITGLEHGVFPHYFSLEEENGIEEE
RRLFYVAITRAKQKLYLTYAKRRRISSGTMEQAPSSFLMEIPKSLLYIKEKANSYYIEID
EDAFDY
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggataataataaacaaaatgatttacttaatggtttaaacgaaaatcaaaaagaaggt
gtgcttcatatagatagtcctcttcttctcttggcaggtgctggaagcggtaagacttta
gttatcacaaaaaagatagcataccttataacagaaaaacacataaggccagaaaatata
atggctgtaacttttacaaataaagcagctaatgaaatgaaagaaagagtatgctctatg
cttccagaaataaaaccatttaggctttttataagaacatttcactctgcatgtttgaga
atattaaaagataatgctcaatatttaaattatagagaagactttcttattttggacgag
ggcgatagattaagcgttataaaaaaaataatgaaagaagaaaacactccaaaatctata
aagccgaaagatgtttcaagatatatatctgccaaaaaaaatgaaatgagatatgatatt
ggttttgaagaagagtattacaaaaaagtatatgataaatacaaagagtatgaagttaaa
gaaaatgtaatggactttgatgatttaatactcaacacaataaaactatttgaaaaagaa
aaaaatatacttgagttttatcaaaagagatttaaatatattttagttgatgagtttcaa
gatacaaatttgcagcaatacaaattaataaaaatgcttactcaaaaaaataataacaaa
gaaacagataatcaattaactgttgtaggcgatgatgaccagagtatatatgcctttagg
ggagcaaatgtatctaatatattaaactttgaaaatgattttgagaacactaaaataatt
cgccttgaagaaaattacagatgccctaagaatgtagttgaagtggctttgaatgtaata
aaaaataatagccatagacacacaaaaaatgttttttcaaacaaaaaaagcgattataaa
atagaaaattggatatgctatacagattatgaagaggcaaaatcggttgctaatgaaatt
gaattattgtttgatgaaggttttgaagcaaaagatatagttattttgtttagaaccaac
agccaatcaagagcatacgaaaaagaacttatggctcattctattaattataaaatagta
ggaggcgttggattttatgagagagcagagattaaagacagcatttcttttttgagactt
cttacaggttttaatgataactttagcataagaagaactatcaatacaccaacaagagga
ataggagaaaaaacttttgcccaatttgaagcatttgcagataaaaaaaatctcacactc
tatgatgcaatagatattatagaagaatctaatatttcaaaaaaagctcttaacagcatt
aaagaatataaaaatatattggaaaaatattcaaaaaaaacagaagaagatcctcagcat
atagaaggagtattttttgagtttctcaaggaaatagattatttttcaatatttaaaagc
gacggcaatataagaatagcaacagcagaagataatataaaagagctttttaatgcatat
tatagttatttaaattacaattatgaaaacccagaaagcagtttaaatataaggggattt
ttagaagagacaacactatacaaagacaacagcaacgaagataaagaagatgcaatcact
cttatgacagtacacaatgccaaaggactagaatttgaagtggtgtttattacagggctt
gaacatggagtttttcctcattatttttcactagaagaagaaaacggcatagaagaagag
agaagacttttttatgtagcaattacaagagctaaacaaaaactatacctcacatacgca
aaaagaagaagaataagctcaggcactatggaacaagctccttcatcatttttaatggag
ataccaaaatctttattatatataaaagaaaaggctaatagctattatatagaaatagat
gaagatgcattcgattattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

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