KEGG   Burkholderia pseudomallei BPC006: BPC006_I0580Help
Entry
BPC006_I0580      CDS       T02301                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bpq  Burkholderia pseudomallei BPC006
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:bpq00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    BPC006_I0580
Enzymes [BR:bpq01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     BPC006_I0580
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BPC006_I0580
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
I:542955..543776
Genome map
AA seq 273 aa AA seqDB search
MPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGFAEMLRSREVLRVERRGKYLLFE
VDAGWFIVHLGMTGTLRVLPNDAPPPAPAKHDHVDWIFDEFVLRFRDPRRFGAVLWHPRD
AGDVHAHPLLASLGVEPFSAAFSGALLFGRTRGRTVSVKQALLAGDIVVGVGNIYASESL
FRAGIRPTTAAGRVSLPRYERLADAVRATLADAIERGGSTLRDFVGSNGESGYFQLDCFV
YDRAGEPCRVCGAPIRQIVQGQRSTYFCPNCQR
NT seq 822 nt NT seq  +upstreamnt  +downstreamnt
ttgccggaagtcgaggttacgcgccggggcatcgagccgttcgtcgccgggcggcgcgtc
gagcgcgtcgacgtgcgcaccgccatgctgcgctggcccgtgcccgccggcttcgccgag
atgctccgatcgcgcgaggtgctgcgcgtcgagcggcgcggcaagtatctgctgttcgaa
gtcgacgccggctggttcatcgtccatctcggcatgacgggcacgctgcgcgtgctgccg
aacgacgcgccgccgcccgcgccggcgaagcacgatcacgtcgactggattttcgacgaa
ttcgtgctgcgctttcgcgatccgcgccgtttcggcgcggtgctctggcatccgcgcgac
gcgggcgacgtgcacgcgcatccgctgctcgcgagcctcggtgtcgagccgttctcggcc
gcgttctcgggcgcgctcctcttcggccgcacgcgcgggcgcacggtgtccgtcaagcag
gcgctgctcgcgggtgacatcgtcgtcggcgtcggcaacatctatgcgtccgagagcctc
tttcgcgcgggcatccggccgaccacggcggcggggcgcgtatcgctgccgcgctacgag
cggctcgccgacgcggtgcgcgcgacgctcgccgatgcgatcgagcgcggcggcagcacg
ctgcgcgacttcgtcggcagcaacggcgagagcggctatttccagctcgactgcttcgtc
tacgatcgcgcgggcgagccgtgccgcgtctgcggcgcgccgatccgccagatcgtccag
gggcagcgatccacctatttctgtccgaattgtcagcgttaa

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