KEGG   Burkholderia pseudomallei MSHR346: GBP346_A1410
Entry
GBP346_A1410      CDS       T00894                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
bpr  Burkholderia pseudomallei MSHR346
Pathway
bpr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    GBP346_A1410 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpr03400]
    GBP346_A1410 (recB)
Enzymes [BR:bpr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     GBP346_A1410 (recB)
DNA repair and recombination proteins [BR:bpr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     GBP346_A1410 (recB)
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C PDDEXK_1 UvrD_C_2 DUF374
Other DBs
NCBI-ProteinID: ACQ96336
Position
I:1359248..1363030
AA seq 1260 aa
MSHVAPSGPSASELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVV
TFTKAATAELHERIRARLAQLAHALDTGDDGGDPFIARLFETTLAPERGLDPQTAAKRVR
RALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDGALRFELAADFWRTRVEPV
AAAYPAFAEWLVEYGAGPAALDAQLARRLKKPLARLRWDGLHAADDGAESAARAHFDTAA
AIWRDERGVLGTLLADAQPSLNQRSHKPEAVSEALDAWARYFEQASAVAALPRAALKLTQ
SALEKATKKGGATPRHAFFDVAQALEAAVAALEAAQRARWLSLVEQWLDAAPAELAQRKR
TRRVVSFDDLLANLYRALDAHPWLRETLRARYPAALIDEFQDTDPLQFAIFDTIFAPAGP
LFLVGDPKQAIYSFRAADLHTYLAARARASARYTLAVNQRSTPAIVGACNRVFGANPRAF
VLDGLDYEPVRAGSRVRAPLVDATDPLAGAGDFRIWTLPAGDDVLTKRDAQRHAAHACAA
EIARLMRGARERAVTLGGEPLAASGIAVLVQTHRQGSLVKRVLAAWGIGSVELAQASVFA
TIDAEQLERVLAAIDAPGDLRRLRSALASDWFGLDAAALWRLEQGDAEQDGIDAAARAAS
AGAPAPSPADADAMGWVERFSRYRLLWRERGFAVMWRTLAGELRIAERLMAGADGERRVT
DVNHLAELTQARASAQPGIAPTLRWLAAQRLEGGGDDAQLRLESDRNLVQIVTVHKSKGL
EYAIVFCPFLNDGGLREPAGSGLPDAREYHDESGCAVLHYGCDDEAAERASREAVREQAA
ERARLVYVALTRAVYRCYLVAGTYQSSRSTKEARRSVLNWLVAGAGRDFDAWLKEPPEDA
ELAERWQALAGGPVTLGALPVPAHREPLAAGHDAQATRAARRATRGLRDAWRIASFSSLA
SAIARDESGIARAADDEMRPDHDALAAALGADALEPPDAAAAIAPAPAAAPRELAEDDIL
AFPRGAAAGECLHRLLELSNFADASTWPPAALRALHERPVEAELALAERLPAMMTRLVAD
LAATELVPGMRLAALDPARRLTEMEFLFPAPALDFNALRRLLAAHGYPDVALEAGTLAGF
VKGFIDMIVEHDGRFWIVDWKSNHLGTTPEAYGERALDAAMAHHAYHLQALLYMVALHRY
LHVRMRGYDYDAHIAGYLYVFVRGVRPDWRNGGASAGVHARRPARALIEALDALMREGDA
NT seq 3783 nt   +upstreamnt  +downstreamnt
atgagtcacgtcgcgccatccggcccgtcggcgagcgagctcgacgtgttcgcgtgtccg
ctcgacggtgtgaaccagatcgaggcgtccgcgggcaccggcaagacctggaacatctgc
gcgctgtacgtgcgcctgctgctcgaaaaggatctcggcgcggacgagattctcgtcgtc
acgttcacgaaggcggcgacggccgagctgcacgaacggattcgcgcgcgcctcgcgcag
ctcgcgcacgcgctcgacacgggcgacgacggcggcgatccgttcatcgcgcgcctgttc
gagacgacgctcgcgcccgagcgcgggctcgatccgcaaacggcggcgaagcgcgtgcgt
cgcgcgctgcgcgcattcgaccaggcggcgatccacacgatccacgcgttctgccagcgg
gcgctgcaggaagcgccgttcgcggcggcgatgccgttcgcgttcgagatggaagcggac
gacggcgcgctgcgcttcgagctggccgccgatttctggcgcacgcgtgtcgagcccgtc
gcggcggcctatccggcgttcgccgagtggctcgtcgagtacggcgcggggccggcggcg
ctcgacgcgcagctcgcgcggcggctgaagaagccgctggcgcgattgcgctgggacggc
ttgcacgcggccgacgacggcgcggaaagcgccgcgcgcgcgcacttcgatacggcggcc
gcgatctggcgcgacgagcgcggcgtgctcggcacgctgctcgccgacgcgcagccgtcg
ttgaaccagcgctcgcacaagccggaggcggtgagcgaggcgctcgacgcgtgggcgcgt
tatttcgagcaggcgagtgcggtggccgcgttgccgcgcgcggcgctcaagctcacgcag
tccgcgctcgagaaagcgacgaaaaagggcggcgcgacgccgcgccacgcgttcttcgac
gtcgcgcaggcgctcgaggcggctgtcgccgcgctcgaggccgcgcagcgcgcgcgctgg
ctgtcgctcgtcgagcaatggctcgacgcggcgcccgccgagctcgcgcagcgcaagcgc
acgcgccgcgtcgtatcgttcgacgatctgctcgcgaacctgtatcgcgcgctcgacgcg
catccgtggttgcgcgagacgctgcgcgcgcgctatccggccgcgctcatcgacgaattc
caggatacggacccgctgcagttcgcgatcttcgatacgatcttcgcgcccgccggcccg
ctctttctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggcggacctgcac
acgtatctcgccgcgcgcgcgcgggcgtccgcgcgctacacgctcgcggtgaaccagcgc
tcgacgcccgcgatcgtcggtgcgtgcaaccgcgtgttcggcgcgaacccgcgcgcgttc
gtgctcgacgggctcgattacgaaccggtgcgcgcgggctcgcgcgtgcgcgcgccgctt
gtcgacgcgaccgatccgcttgccggcgcgggcgacttccgcatatggacgctgcccgcc
ggcgacgacgtgctgaccaagcgcgacgcgcagcggcacgccgcgcatgcatgcgcggcg
gaaatcgcgcggctgatgcggggcgcgcgcgagcgcgcggtgacgctcggcggcgagccg
ctcgcggcgtccggcatcgcggtgctcgtgcagacgcaccggcagggcagtctcgtgaag
cgcgtgctggccgcatggggaatcggcagcgtcgagctcgcccaggcgtcggtattcgca
acgatcgatgccgagcagctcgagcgcgtgctggccgccatcgacgcgccgggcgacctg
cggcgcctgcgctcggcgctcgcgtccgactggttcgggctcgatgcggcggcgctctgg
cgcctcgagcagggcgatgccgagcaggacggcatcgacgccgccgcccgcgccgcatcg
gcgggcgcgcccgcgccgtcgcccgcggacgccgatgcgatgggctgggtcgagcgcttc
tcgcgctaccggctgctgtggcgcgagcgcggcttcgcggtgatgtggcgcacgctcgcc
ggcgagctgcgcatcgccgagcggctgatggcgggggcggacggcgagcggcgcgtgacc
gacgtcaatcacctcgccgagctgacgcaggcgcgcgcgtccgcgcagccgggcatcgcg
ccgacgctgcgctggcttgccgcgcagcgcctcgaaggcggtggggacgacgcgcagttg
cggctcgaatccgaccgtaacctcgtgcagatcgtcaccgttcacaagtcgaaggggctc
gaatacgcgatcgtgttctgtccgttcctgaacgacggcgggctgcgcgagccggccggc
tccggcctgcccgacgcgcgcgagtaccacgacgaatcgggctgcgcggtgctgcattac
ggctgcgacgacgaagcggccgagcgcgcgtcgcgcgaggcggtgcgcgagcaggcggcc
gagcgcgcgcggctcgtctacgtcgcgctcacgcgcgccgtctatcggtgctatctggtc
gcgggcacctatcagtcgtcgcgttcgacgaaggaggcgcggcgcagcgtgctgaactgg
cttgttgcgggcgcgggccgcgatttcgatgcgtggctgaaggagccgcccgaagacgcg
gagctcgccgagcgctggcaggcgctcgcgggcggcccggtgacgctcggcgcgctgccg
gtgcccgcgcatcgcgagccgctcgcggccgggcacgatgcgcaggcgacgcgagccgcg
cgacgtgcgacgcgtggcttgcgcgacgcatggcggatcgcgagcttcagctcgctcgca
tcggcgatcgcgcgcgatgagagcggcatcgcgcgcgcggccgacgacgagatgcgcccc
gatcatgacgcgcttgccgccgcgctcggcgcggacgcgctcgagccgccggacgcggcc
gccgcgatcgcgccggcgcccgccgccgcgccgcgcgagctcgccgaagacgacatcctc
gcgttcccgcgcggcgcggcggcgggcgaatgcctgcaccggctgctcgagctgagcaat
ttcgccgatgcgtcgacgtggccgcccgccgcgctgcgcgcgctgcacgagcgcccggtc
gaggcggagctcgcgctggccgagcggctgcccgcgatgatgacgcggctcgtcgccgat
ctcgcggcgacggagctcgtgccgggcatgcgcctcgcggcactcgatccggcgcggcgg
ctcacggaaatggagttcctgtttcccgcgcccgcgctcgatttcaacgcattgcggcgc
ttgctcgccgcgcacggctatccggacgtcgcgctcgaagcgggcacgctggccggattc
gtcaaaggattcatcgacatgatcgtcgagcacgacggccgcttctggatcgtcgactgg
aaatcgaatcatctcggcacgacgcccgaagcatacggcgagcgggcgctcgacgccgcg
atggcgcatcacgcgtatcacctgcaggcgctgctctatatggtcgcgctgcatcgctat
ctgcacgtgcgcatgcgtggctacgactacgacgcgcacatcgcgggctatctgtacgtg
ttcgtgcgcggcgtgcgtcccgattggcgaaatggcggcgcgagcgccggcgtgcatgcg
cggcggcccgcacgcgcgctgatcgaggcgctcgacgcgctgatgcgcgagggggatgca
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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