KEGG   Burkholderia pseudomallei MSHR346: GBP346_A3668
Entry
GBP346_A3668      CDS       T00894                                 
Name
(GenBank) hydrolase, NUDIX family
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
bpr  Burkholderia pseudomallei MSHR346
Pathway
bpr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GBP346_A3668
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpr03019]
    GBP346_A3668
Messenger RNA biogenesis [BR:bpr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     GBP346_A3668
SSDB
Motif
Pfam: NUDIX
Other DBs
NCBI-ProteinID: ACQ97497
Position
I:3539369..3540019
AA seq 216 aa
MLDREGFRPNVGIILLNAHNEVFWGKRLREHSWQFPQGGIKYGETPMQAMYRELHEETGL
LPEHVKIIGRTRDWLRYEVPDKFIKREVRGHYRGQKQIWFLLRMVGRDCDICLRATDHPE
FDAWRWNEYWVPLDAVIEFKRDVYQLALTELSRFLRRPAQRTDKSRGPRAPRYPRVANGH
AASEAPAAIDTSAVCSEVEPGANALDETPPRVSLRD
NT seq 651 nt   +upstreamnt  +downstreamnt
atgctggatcgtgaaggctttcgcccgaacgtcggcatcatcctcttgaacgcgcacaac
gaggtgttttggggcaaacggctccgcgagcattcctggcagtttccgcaagggggcatc
aagtacggcgagaccccgatgcaagcgatgtacagggaactgcacgaggagaccgggctg
ctgccggaacacgtcaagatcatcggccgcactcgcgactggttgcgttatgaggtgcca
gacaagttcatcaagcgcgaagtgcgcggccattatcgcggccagaagcagatctggttc
ctgctgcgaatggtcggccgcgattgcgacatctgcctgcgggcgacggatcatccggag
ttcgacgcgtggcgctggaacgaatactgggtgccactcgacgcggtgatcgagttcaag
cgggatgtgtatcagttggcgttgaccgaactgtcgcgtttcctgcgccgcccggcgcag
cgcaccgacaaatcgcgcggcccgcgcgcgccgcgctatccgcgtgtcgcgaatgggcac
gcggcatcggaggcaccggccgcgatcgacacgtcggcagtctgttcggaagtcgagccg
ggcgcgaacgcgctcgacgaaacccctccccgcgtgagtctgcgcgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system