KEGG   Burkholderia pseudomallei MSHR346: GBP346_A3800
Entry
GBP346_A3800      CDS       T00894                                 
Symbol
icmF_1
Name
(GenBank) type VI secretion protein IcmF
  KO
K11891  type VI secretion system protein ImpL
Organism
bpr  Burkholderia pseudomallei MSHR346
Pathway
bpr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bpr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    GBP346_A3800 (icmF_1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bpr02044]
    GBP346_A3800 (icmF_1)
Secretion system [BR:bpr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   GBP346_A3800 (icmF_1)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: ACQ98600
Position
I:3659169..3663062
AA seq 1297 aa
MQRFLNVLTHPRTLTIVGFAALAAVLFIAADALQIGLAWAAVALGVALALWLATKLWRRW
RVRRANRQLGDMLEQQAETGKMSAAVAEPAKRAELDVLRTRLADTVKTIKTSKIGQVSGG
SALYELPWYIVIGNPAAGKSSAVINSGLQFPFADKNSAVIHGIGGTRNCDWFFTTEGILL
DTAGRYSVHEEDRSEWLGFLDLLKRYRPKAPINGIIVTASIAELTGNRPEFAINLAKNLR
QRVQELTEKLEVFAPVYVMFTKADLITGFTEFFSSNDRQEYDRVWGATLPYEPDEKRDVV
ALFDQRFEELYDGLKEISVAQLSVSRGNKLSPGQLSFPLEFSTIKPALRSFLATLFEDNP
FQYKPIFRGFYFTSALQEGETNSAAAQRIAHRFGLDSQSLPKPHSAFSKNGFFLRDLFSK
VIFADRQTVRQFASPTKTRMRYATFFGFVAALALALGGWTWSTIGNQQLVSNVQADLDNV
TRLQQNRNDLQSRLQAMDILEDRIEQLEQFRRDKPLSVSLGLYQGNRLEQHLLTEYYNGV
RQILLAPVSDNLASFLKDVNAHPDQLAPMTRAPESGATPAGPMPVSTHPAAPGAAPSPAV
AQGRQQGGLYNDASPTNVEDAYNALKTYLMLSDKRHVEQAHLTDQVARFWRGWLETNRGN
MPRDEMIRSAERMITFYLSRVSDNDWPMIEANLALVDQTRENLRRVVRGMPARQRVYEEI
KARASTRFAPMTIARIVGEGNTGLVAGSYAIPGTFTRDAWFQYVQPAIRDAATKELQAKD
WVLNTASADDLTLEGSPEQIQKTLVAMYKTEYAQHWQKFMQGIAVQGFGNFTQAVDAMNK
LGDPQDSPIRKVLETAYDQTSWDNPSLANATIKKAQTGVVNWVKQWFTRQPGGQIAANVD
INGNPADVPMGPIGQEFVGLGRIVATHDGTSMLKGYMDTLSKVRTRFNVIKNQGDPGPGA
RQLMQQTLDGNGSELADSLKFVDEQMLTGLTDSQRKSLRPLLVRPLMQAFAVVIQPASVE
VNKVWNAQVYQPFQNSLANKYPFAAGAKVEAGAGEIAQVFGPDGSIAKFVGTTLGPLAVR
RGDTLSARTWGDMGLALTPDFTGGFARWVAPLAGGAATSAAASSEPQTVFQVLPQPSSGT
TEYTIAIDGQQLRYRNTPPQWTNFVWPNPQGSPGATLSATTFDGRTLQLVNEPGRYGLEK
LINSAQRKRRPDGTFDLTWTQGSVSVSVTMRIISTSQPTGGGDQPQQQSLRGLRLPSSVA
DASAGGAANATAQPGSGAAAPQVAATAASASNAQGAQ
NT seq 3894 nt   +upstreamnt  +downstreamnt
atgcaacgcttcctcaacgtgttgactcaccctcgcacgctcacgatcgtcggcttcgcc
gcgctcgcggcggttctgttcatcgcggccgacgcgctccagatcggcctcgcatgggcg
gccgtcgcgctcggtgtcgcgctcgcgctctggctcgcgacgaagctctggcgccgctgg
cgcgtgcgccgcgcgaaccgccagctcggcgacatgctcgagcagcaggccgaaacgggc
aagatgtccgccgccgtggccgagcccgcgaagcgcgcggagctcgacgtgctgcgcacc
cgcctcgccgacacggtgaagacgatcaagacttcgaaaatcggccaggtgtcgggcggc
tccgcgctgtacgaactgccgtggtacatcgtgatcggcaatccggccgcgggcaagagc
agcgccgtcatcaactcggggttgcagtttccgttcgcggacaagaacagcgcggtgatc
cacggcatcggcggcacgcgcaactgcgactggttcttcacgaccgaaggcatcctgctc
gacaccgcgggccgctattcggtgcacgaggaagaccgcagcgaatggctcggctttctc
gatctgctcaagcgctatcgcccgaaggccccgatcaacggcatcatcgtgacggcgagc
atcgccgagctcaccggcaatcgccccgaattcgcgatcaacctcgcgaaaaacctgcgc
cagcgcgtgcaggagctcaccgagaagctcgaagtgttcgcgcccgtctacgtgatgttc
acgaaggccgacctgatcacgggcttcaccgaattcttcagcagcaacgatcgccaggaa
tacgaccgcgtgtggggcgcgacgctgccgtacgagcctgacgagaagcgcgacgtggtc
gcgctgttcgatcagcgcttcgaggaactgtatgacgggctcaaggaaatcagcgtcgcg
cagctgtcggtgagccgcggcaacaagctctcgcccggccagttgagcttcccgctcgaa
ttctcgacgatcaagcccgcgctgcgctcgttcctcgcgacgctgttcgaggacaacccg
ttccagtacaagccgatcttccgcggcttctacttcacgagcgcgctgcaggaaggcgaa
acgaacagcgcggccgcgcagcggatcgcgcaccgcttcgggctcgattcgcaaagcctg
ccgaagccgcacagcgcgttctcgaagaacggcttcttcctgcgcgacctgttttcgaag
gtgatcttcgccgatcgccagacggtccgccagttcgcgagcccgacgaagacgcgcatg
cgctacgcgacgttcttcggcttcgtcgcggcgctcgcgctcgcgctcggcggctggacc
tggtcgacgatcggcaaccagcaactcgtctcgaacgtgcaggccgacctcgacaacgtg
acccgcctgcagcagaaccgcaacgatctgcaatctcgcctgcaggcgatggacatcctc
gaggatcggatcgagcagctcgagcagttccggcgcgacaagccgctgtccgtctcgctc
ggcctgtatcagggcaatcggctcgagcagcacctgttgaccgagtactacaacggcgtg
cggcagatcctgctcgctcccgtgtcggacaatctcgcgtcgttcctgaaggacgtgaac
gcgcatccggaccagctcgcgccgatgacgcgcgcgcccgaatcgggcgcgacgccggcg
ggcccgatgccggtatcgacccatcccgcggcgccgggcgcggccccctcccccgccgtc
gcgcagggccggcagcagggcggcctctataacgacgcgtcgccgaccaacgtcgaggac
gcgtacaacgcgctgaagacctacctgatgctctccgacaagcggcacgtcgagcaggcg
cacctgaccgatcaggtcgcgcgcttctggcgcggctggctcgagacgaatcgcggcaac
atgccgcgcgacgagatgatcaggagcgcggagcgaatgatcacgttctacctgtcgcgc
gtgtccgacaacgactggccgatgatcgaggcgaatctcgcgctcgtcgaccagacccgc
gagaacctgcgccgcgtcgtgcgcggcatgccggcccgccagcgcgtgtatgaagagatc
aaggcgcgcgcgtcgacccgcttcgcgccgatgacgatcgcgcgcatcgtcggcgaaggc
aacaccggcctcgtcgcgggcagctacgcgatccccggcacgttcacgcgcgacgcgtgg
ttccagtacgtgcagccggcgatccgcgacgccgcgacgaaggagctgcaggcgaaggat
tgggtgctgaacaccgcgtcggcggacgatctgacgctcgagggcagccccgagcagatc
cagaagacgctcgtcgcgatgtacaagaccgagtacgcgcagcactggcagaagttcatg
cagggcatcgcggtgcagggcttcggcaatttcacgcaggcggtcgacgcgatgaacaag
ctcggcgatccgcaggattcgccgatccgcaaggtgctcgagaccgcgtacgaccagacc
tcgtgggacaacccgtcgctcgcgaacgcgacgatcaagaaggcgcagacgggcgtcgtg
aactgggtcaagcagtggttcacgcgccagccgggcggccagatcgcggcgaacgtcgac
atcaacggcaatcccgccgacgtgccgatgggcccgatcggccaggagttcgtcgggctc
ggccggatcgtcgccacgcacgacggcacgtcgatgctcaagggctacatggacacgctg
tcgaaggtccgcacgcgctttaacgtgatcaagaaccagggcgaccccggccccggcgcg
cgtcagctgatgcagcagacgctcgacggcaacggctcggagctcgccgattcgctgaag
ttcgtcgacgagcagatgctcacgggcttgaccgattcgcaacgcaaatcgctgcgcccg
cttctcgtgcgcccgctgatgcaggcgttcgcggtcgtgatccagccggcgagcgtcgag
gtgaacaaggtatggaacgcgcaggtgtaccagccgttccagaactcgctcgcgaacaag
tatccgttcgcggcgggcgcgaaggtcgaggcgggcgcgggcgagatcgcgcaggtgttt
ggccccgacggctcgatcgcgaagttcgtcggcacgacgctcggcccgctcgcggtgcgc
cgcggcgacacgctgtccgcgcgcacctggggcgacatgggcctcgcgctcacgccggac
ttcacgggcggcttcgcgcgctgggtcgcgccgctcgcgggcggcgcggcgacgagcgcg
gccgcgtcgtccgagccgcagaccgtgttccaggtgctgccgcagccgagcagcggcacg
accgaatacacgatcgcgatcgacggccagcagctgcgctaccgcaacacgccgccgcaa
tggacgaacttcgtgtggccgaacccgcagggctcgcccggcgcgacgctgtccgcgacg
accttcgacggccgcacgttgcagctcgtcaacgagccgggccgctacggcctcgagaag
ctgatcaactcggcgcagcgcaagcgccgtccggacggcacgttcgatctgacatggacg
cagggcagcgtcagcgtctcggtgacgatgcgcatcatcagcacctcgcagccgacgggc
ggcggcgatcagccgcagcagcaaagcctgcgcggcctgcgcctgccttcgtcggtcgcc
gacgcgagcgcgggcggcgcggccaatgcgacggcgcaacccggctcgggcgccgcggcc
ccgcaggtcgccgccacggccgcttccgcatcgaacgcacagggggcgcaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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