KEGG   Butyrate-producing bacterium SS3/4: CK3_10450
Entry
CK3_10450         CDS       T02611                                 
Name
(GenBank) helicase, putative, RecD/TraA family
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
bprs  Butyrate-producing bacterium SS3/4
Pathway
bprs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bprs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CK3_10450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bprs03400]
    CK3_10450
Enzymes [BR:bprs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CK3_10450
DNA repair and recombination proteins [BR:bprs03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CK3_10450
SSDB
Motif
Pfam: AAA_19 HHH_4 AAA_30 SH3_13 UvrD_C_2 AAA_11 Viral_helicase1 Helicase_RecD HHH_5 AAA_22 T2SSE HHH_2 PIF1 UvrD-helicase NTPase_1 nSTAND3 PhoH SLFN-g3_helicase SRP54 bpMoxR AAA_16 AAA_28 AAA FtsK_SpoIIIE DEAD AAA_7 AAA_5 UvrD_C ResIII STPRs
Other DBs
NCBI-ProteinID: CBL40797
UniProt: D7GSL0
Position
1056966..1059212
AA seq 748 aa
MATVTGYVERIKYRNEDNGYSVLSVADGGEEYILVGTFPYISEGERIEATGRMVEHSIYG
EQLAVESYEIKAPEDTLAIERYLGSGAIKGIGAALAKRIVKKFKADTFRIMEEEPERLAE
VKGVSERMAMEISSQVEEKRDMRQAMVFLQQYGISMNLAVKIYQHYGPGMYSVIQENPYQ
LADDIQGVGFKIADEIAAKVGIFTDSDYRIRSGLFYALLQATGNGHTYLPEEELFANASA
LLNVEPEHMEKHLVDLQMEKKLVVKEKDEKRIVYPAQFYYMELNTARMLHDLNLHSKIDE
DDVKKRLKKITEAEKIELDELQEQAVMEAVGNGLLIITGGPGTGKTTTINTIIHYFDQED
MDILLAAPTGRAAKRMTEATGYEAKTIHRLLELTGAPTVDQKNNGNSGENRLEGMHFERN
EENPLDADVIIIDEMSMVDISLIHSLLKAVNVGTRLILVGDVNQLPSVGPGNVLRDMIAS
EAFPVVKLTKIFRQAAQSDIIVNAHKINDGEAVPLNKKSRDFLFIRRDYPADIVKDMMVL
VQDKLPNYVHAEMSDIQIMTPMRKGALGVEALNKQLQEKFNPPAPNKQEKESGGTIFRVG
DKVMQIKNNYQIEWEVRNRYGIPVDKGEGVFNGDTGIIRSINSFAETMEVEFDERRMVEY
SFKQLEELELAYAITIHKSQGSEYPAVVIPVHSGPRMLMTRNLIYTAVTRAKSCVCLVGI
PEVFQAMVDNEVEQKRYSGLKDRILEIT
NT seq 2247 nt   +upstreamnt  +downstreamnt
atggcaactgtaacaggctatgtggaaagaatcaaataccgcaacgaggataacggttac
tcggtcttaagcgtggcggacgggggagaagaatatatcctcgtcggtacatttccctac
atcagtgagggagagcggatcgaggcgacgggccggatggtggaacactccatctacggt
gaacagcttgcggtggagagctatgagataaaagctcccgaggacacactggcgattgaa
cggtatctcggctccggtgctatcaaaggcatcggagctgctttagctaaaaggatcgta
aagaagttcaaggcggacaccttccggattatggaagaggagccggaacgtctcgccgag
gtcaagggtgtcagcgagcgcatggcgatggagatcagcagccaggtggaggaaaaaaga
gatatgcgtcaggccatggtgttccttcagcagtacgggatctccatgaaccttgcagtg
aagatctatcagcattacggtccgggaatgtactcggtcatccaggaaaatccgtatcag
ctggcggacgatatccagggggtgggatttaagatcgcggacgagatcgcggcgaaggtc
gggatcttcacggattccgattaccggatccgcagcggacttttctacgccctgctccag
gcgacgggaaacggccatacatatctgccggaggaggagctgtttgccaacgcatcggca
ctcttaaatgtggaaccggagcacatggaaaagcacctggtggatctccagatggagaag
aagctggttgtgaaggaaaaggatgagaagcggatcgtctacccggcgcagttctactat
atggaactcaatacggcgagaatgctgcatgacctgaatctccactcgaagatcgatgag
gacgacgtgaaaaaacggctcaaaaagatcacggaggcggagaagatcgagctggacgag
cttcaggagcaggcggtcatggaagctgtgggtaacggtctccttatcatcaccggaggt
ccgggaaccggtaagacgacaaccatcaacacgatcatccactatttcgaccaggaagac
atggacattcttctggctgccccgacgggccgtgcggcgaagcgcatgacggaggcgacg
ggatacgaggcgaagacaattcacagacttctggagcttacgggcgctccgacggttgat
cagaaaaacaacggcaattccggcgagaaccggctggagggcatgcattttgagcggaac
gaggagaatcctctggacgcggatgtgatcatcatcgatgaaatgtccatggtggatatc
agcctgatccactcactcttaaaggcggtgaatgtaggaacgaggctgatccttgtaggt
gatgtaaaccagcttcccagcgtgggaccgggaaatgttctccgggacatgatcgcgtcg
gaggcgttccctgtggtgaagctcacaaagatcttccgtcaggcggcccagagcgacatt
atcgtcaatgcccataagatcaacgacggggaagcggttcctttaaataagaagagccgt
gactttctgtttatccggcgcgattatccggcagatattgtgaaggatatgatggtcctc
gtgcaggacaagcttccgaactatgtccatgccgagatgtcggatatccagatcatgacg
ccgatgcggaaaggcgctctcggagtcgaggcgttaaataagcagcttcaggagaagttt
aacccgcctgcgccgaataagcaggagaaagagtccggcggaacgatcttccgtgtgggc
gataaggtcatgcagatcaagaacaactatcagatcgagtgggaggtccgcaaccgctac
ggaatcccggtggataagggcgaaggcgttttcaacggggatacggggatcatccgctcc
atcaacagcttcgcggagaccatggaggtggaattcgatgagcggcggatggtggagtac
agctttaagcagttggaggagctggagcttgcctacgcgatcacgatccacaaatcccag
ggaagcgaatatccggcagtggtgatcccggtccattcgggaccgcggatgctgatgacg
agaaacctgatctacacggcggttacgagggcgaaatcttgcgtctgcctcgtgggaatc
ccggaggtgttccaggcgatggtggataatgaggtggagcagaaacggtattcggggctg
aaagatcggattctggagataacatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (110)   
   KEGG ORTHOLOGY (1)   
   RefGene (107)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (30)   
   Pfam (30)   
All databases (147)   

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