KEGG   Burkholderia pseudomallei K96243: BPSS2094
Entry
BPSS2094          CDS       T00203                                 
Name
(GenBank) putative Clp protease ATPase
  KO
K11907  type VI secretion system protein VasG
Organism
bps  Burkholderia pseudomallei K96243
Pathway
bps03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bps00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BPSS2094
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bps02044]
    BPSS2094
Secretion system [BR:bps02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BPSS2094
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 nSTAND3 AAA_7 Sigma54_activat RuvB_N Zeta_toxin TniB AAA_18 AAA_24 AAA_14 AAA_25 Clp_N NACHT Hpr_kinase_C Rad17 T2SSE AAA_33 SRP54
Other DBs
NCBI-ProteinID: CAH39574
UniProt: Q63IH9
Position
2:complement(2833428..2836094)
AA seq 888 aa
MSDIGRVTLFGKLNTFLYETLEQATGFCRLRGNPYVELAHWLNQMLRRPDSDVHRILRRF
DIDAAAIDRGIVSALDRLPRGAGSVSDLSAHIDDAVERAWVYATLKYDAAQIRGAVLLLA
LVKTPQLRNVLYAIARDFERIVPDVLADELERIVAGSPEAPSPAARAAAGAIGDAGAAPS
AAREGSALARYAIDLTARARAGEIDPVVGRDGEIRQIVDILLRRRQNNPLLVGEAGVGKT
AVAEGFALRIVAGDVPPPLRDVELYLLDIGLLQAGASVKGEFESRLRGVIDEASSSERPV
ILFIDEVHTLVGAGGAAGTGDAANLLKPALARGVLRTIGATTWSEYKQYIEKDPALTRRF
QLVQVREPEEGAALAMLRGLAAKLEAHHRVLVLDDALQAAVTLSHRYVPARQLPDKAISL
LDTACARVAVSQHAVPAPIEDVRRRIDSLRVERELIARECALGAGDAQRLDAIDASIAGE
QTTLDALDARWQAERDALGKIVDWRASLLADDSSRVLDEAARADVQAKLSAALRALAELQ
GETPLVLPAVDTHAVAAVVSDWTGIPLGRMVRDEMQSVLKLAETLAERVVGQPHAVELIA
ERIQTARARLDDPAKPHGVFLLCGPSGVGKTETALALAEMLYGGEHNAITINMSEFQEAH
TVSTLKGAPPGYVGYGQGGVLTEAVRRRPYSVVLLDEIEKAHRDVHEIFFQVFDKGWMED
GEGRYIDFRNTVILLTSNVGSERVMQLCRDPQRLPDAQTLTDALRAPLREVFPAALLGRL
TVVPYYPLTDEMLARIVALQLARIERRIEAHHGIALRCADSATALIAERCRTIESGGRMV
DAILTHTVLPRISQEILRATIEGRALRAIDVSAEDGQFVYRFEEEGAT
NT seq 2667 nt   +upstreamnt  +downstreamnt
atgtccgatatcggccgagtgaccttgtttggaaaactgaacacttttctctacgagacc
ctggagcaggcgaccggcttttgtcggctgcgcggcaatccctatgtcgagctcgcgcac
tggctgaaccagatgctccggcgcccggacagcgacgtgcaccggatcctgcgccgcttc
gacatcgacgcggcggcgatcgaccgcgggatcgtttcggcgctcgaccggctgccgcgc
ggcgcgggttccgtgtccgatctgtccgcgcacatcgatgatgcggtcgaacgcgcatgg
gtgtacgcgacgctcaagtacgacgcggcgcagattcgcggcgcggtgctgctgctcgcg
ctcgtgaagacgccgcagctgcgcaacgtgctgtacgcgatcgcgcgggacttcgagcgc
atcgtgcctgacgtgcttgccgacgagctcgaacggatcgtcgcaggctcgccggaggcg
ccgtcgcccgccgcgcgcgcggcggcgggggcgatcggcgacgcgggggcggcgccgtcc
gccgcgcgcgaaggctcggcgctcgcgcgctacgcgatcgatctgaccgcgcgtgcgcgc
gcgggcgagatcgatccggtggtcggccgcgacggcgagattcggcagatcgtcgacatc
ctgctgcgccgccggcagaacaatccgctgctcgtcggcgaggcgggcgtcggcaagacc
gcggtcgccgaaggcttcgcgctgcgcatcgtcgcgggcgacgtgccgccgccgctgcgc
gacgtcgaactgtatctgctcgacatcggcctgctgcaggcgggcgcgagcgtgaagggc
gaattcgagagccgcctgcgcggcgtgatcgacgaggcgagttcgagcgagcggcccgtc
attctgttcatcgacgaggtacacacgctcgtcggcgcgggcggcgcggcgggcacgggc
gacgcggcgaacctgttgaagcccgcgctcgcgcgcggcgtgctgcgcacgatcggcgcg
acgacgtggtccgaatacaagcaatacatcgagaaggacccggcgctcacgcggcgcttc
cagctcgtgcaggtgcgcgagccggaggagggcgcggcgctggcgatgctgcgcgggctc
gccgcgaagctggaggcgcaccatcgcgtgctcgtgctcgacgatgcgctgcaggcggcc
gtcacgctgtcgcatcgctacgttcccgcgcggcagttgccggacaaggcgatcagcctg
ctcgacaccgcgtgcgcgcgcgtcgcggtcagccagcacgcggtgcccgcgccgatcgag
gacgtgcggcggcggatcgatagcctgcgcgtcgagcgcgagctgatcgcgcgcgagtgc
gcgctcggcgcgggcgatgcgcaacggctcgatgcaatcgatgcatcgatcgccggcgaa
cagaccacgctcgatgcgctcgacgcgcgctggcaggcggagcgcgacgcgctcggcaag
atcgtcgactggcgggcctcgctgctggccgacgattcttcgcgcgtgctcgatgaggcg
gcgcgcgcggacgtgcaggcgaagctctcggccgcgctgcgcgcgctcgccgaattgcag
ggcgagacgccgctcgtgctgcccgcggtcgatacgcacgcggtggccgccgtggtgtcc
gactggaccggcatcccgctcgggcggatggtgcgcgacgagatgcaatcggtgctgaag
ctcgccgagacgctcgccgagcgcgtggtcggccagccgcacgcggtcgagctgatcgcc
gagcgcattcagaccgcgcgcgcgcggctcgacgatccggccaagccgcacggcgtgttc
ctgctgtgcgggccgtccggcgtcggcaagaccgagacggcgctcgcgctcgccgagatg
ctgtacggcggcgagcacaacgcgatcacgatcaacatgagcgagtttcaggaggcgcac
accgtatcgacgctcaagggcgcgccgcccggctacgtcggctacggacagggcggggtg
ctgaccgaggcggtgcggcggcggccgtacagtgtcgtgctgctcgacgaaatcgagaag
gcgcaccgcgacgtgcacgagatcttctttcaggtgttcgacaagggctggatggaagac
ggcgaggggcgctatatcgactttcgcaacacggtgatcctcctcacgtcgaacgtcggt
tccgagcgcgtgatgcagctgtgccgcgatccgcagcgcctgcccgatgcgcagaccttg
accgatgcgctgcgcgcgccgctgcgcgaggtgtttcccgccgcgttgttgggacgcctg
acggtcgttccgtactacccgctcaccgacgagatgctcgcgcggatcgtcgcattgcag
ctcgcgcgcatcgagcggcgcatcgaagcgcaccacggcatcgcgttgcgctgcgcggat
tcggcgaccgcgctgatcgccgagcgctgccggacgatcgaatccggcggccgcatggtc
gacgcgattctcacgcacacggtgctgccgcgcatcagccaggagatcctgcgcgcgacg
atcgaggggcgcgcgctgcgggcgatcgacgtgagcgccgaagacggccagttcgtttac
cgattcgaagaggagggcgcgacgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (32)   

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