KEGG   Bifidobacterium pseudocatenulatum: BBPC_0114
Entry
BBPC_0114         CDS       T03932                                 
Name
(GenBank) signal recognition particle-docking protein
  KO
K03110  fused signal recognition particle receptor
Organism
bpsc  Bifidobacterium pseudocatenulatum
Pathway
bpsc02024  Quorum sensing
bpsc03060  Protein export
bpsc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bpsc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BBPC_0114
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BBPC_0114
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BBPC_0114
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bpsc02044]
    BBPC_0114
Secretion system [BR:bpsc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BBPC_0114
SSDB
Motif
Pfam: SRP54 SRP54_N AAA_30 CbiA AAA_22 AAA_24 Zeta_toxin PIF1 AAA_19 6PF2K APS_kinase nSTAND3 cobW AAA_5 AAA_18 AAA_33 SLFN-g3_helicase DUF6855 AAA_16 ABC_tran AAA_31 AAA_17 Thymidylate_kin AAA_28 KTI12 NACHT AAA DUF4330
Other DBs
NCBI-ProteinID: BAR02792
UniProt: C0BR87
Position
151862..153124
AA seq 420 aa
MDTNVIIAIVAVVVIAAILVIGGWWLGKTRKNAVNKSTEDAKAAADARLAAEAKSAAADS
STVKPSVDSNVDAAEKAPAESQQKSSAQASSSETAAPAPATEAKPEPVHETPEAAGTRMQ
RLKARLSKSGNPFGKALFNILAKDQLSEADWEDVEDTLLLADVGAEASEQLVEELRNDAR
ISGQSDPAEVRAALKDKLLKLVGTDTDRRLNADKEGANKPNVIIMVGVNGTGKTTTAGKL
SRLLVSEGKQVMLGAADTFRAAAADQLETWGAKVGVPVVRSDKDGADPASVAFEASAKAK
EENVDVLIIDTAGRLQNKANLMDELGKIRRVTEKNLPVDEVLLVLDATTGQNGMTQAKVF
AEAIGITGVVLSKLDGSAKGGIVISVQKELGVPVKLVGLGEGPDDLAPFDPEGFVDGILA
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggatacgaatgtgattattgcgattgtcgctgttgtcgttattgcggcaattctagtg
attggtggttggtggctcggtaagacccgcaagaacgccgtcaacaagtccactgaggat
gcgaaagcggctgctgatgcccgtcttgctgcggaagcaaagtcggctgcggctgattct
tccacggtgaagccgtccgttgattccaatgttgatgcagctgaaaaagctccggctgaa
agccagcagaagtcctcagctcaagcttcctcttccgaaacggcggctcctgcaccagcc
accgaagccaagcccgaaccggttcatgaaacccccgaagccgccggcacacgcatgcag
cgtcttaaggcgcgcctgtcgaaatccggcaatccgttcggcaaggccctgttcaacatc
ctcgccaaggatcagctctccgaagctgactgggaggacgtcgaagacacccttctgctt
gccgatgttggcgcggaagccagcgaacagcttgtcgaggaactacgcaacgacgcccga
atctcaggccagtccgatccggccgaagtgcgtgccgcgctgaaagacaagctgctgaag
ctcgtaggcactgacacggatcgccgcctcaatgccgataaggaaggcgcgaacaaaccg
aacgtcatcatcatggtcggcgtgaacggcacgggcaaaaccaccactgcgggcaagctt
tcccgcctgctcgtttccgaaggcaagcaggtcatgctgggcgctgccgataccttccgc
gcggcggccgccgaccagttggaaacttggggtgcgaaggtgggcgttccggtcgtgcgt
tccgacaaggacggcgccgatccggcgtccgtcgcattcgaggccagcgccaaggccaag
gaagagaacgtcgacgtgctcatcatcgacaccgccggccgcttgcagaacaaggcgaac
ctcatggacgagctcggcaagatccgccgcgttaccgaaaagaatcttccggtcgacgag
gtgctgctcgtgctcgacgccaccaccggccagaatggcatgacgcaggccaaggtgttc
gccgaagccatcggcattaccggtgtggtgctctccaagcttgacggttccgcaaagggc
ggcatcgtgatttccgtgcagaaggagcttggcgtgcccgtcaagctcgtcggcctcggc
gaaggcccggacgatctcgccccgttcgatccggaaggcttcgtcgacggcatcctcgcc
tga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (38)   

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