KEGG   Basilea psittacipulmonis: IX83_04965
Entry
IX83_04965        CDS       T03226                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
bpsi  Basilea psittacipulmonis
Pathway
bpsi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bpsi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    IX83_04965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpsi03400]
    IX83_04965
DNA repair and recombination proteins [BR:bpsi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     IX83_04965
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      IX83_04965
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 Kinesin AAA_22 Microtub_bd DUF87
Other DBs
NCBI-ProteinID: AIL32743
UniProt: A0A077DI04
Position
1117886..1119904
AA seq 672 aa
MSEAHFKQFAGSPFQLLQLYPPAGDQPQAIASLVQGVKDGLMFQTLLGVTGSGKTYTMAN
VIAELGRPALILAPNKTLAAQLYAEMRAFFPRNAVEYFVSYYDYYQPEAYVPTKDLFIEK
DSSVNEQIEQLRLSATKSLLERRDTIIVGTVSTIYGIGNPNDYHAMVLTLRTGDDIPRKE
LLARLVSMQYQRNDIEFSRGNFRVRGEIIDVFPAENAELALRITLFDDEIEKLELFDPLT
GKVQQTTPRFTIYPSSHYVTPRATILRAIETIKEELVERGNELRANNRLVELQRLEQRTR
FDIEMLQELGFCKGIENYSRHLSGAAPGDPPPTLIDYLPQDALMFFDESHNMMGQLGAMY
RGDRSRKETLVEYGFRLPSALDNRPLKFEEFEQRMHQSIFVSATPAKYEMEHSDQIVEQV
VRPTGLIDPEIIIRPALSQVDDLLSEANATIAKGERVLVTTLTKRMSEDLTQFLSEHGLK
VRYLHSDIDTVERVEIIRDLRLGKFDILVGINLLREGLDIPEVSLVAILDADKEGFLRSE
RSLIQTIGRAARNLHGRAILYADHITDSMKRAIDETNRRRQKQLEFNKVHGIIPKGVSKK
IDDLIDGVSSISDTSDTDTHELFQGDEKAIAKEIKRLEKQMLEHAKNLEFEQAAATRDQL
NRLKQQLLFEAS
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgtctgaagctcatttcaaacagtttgcaggaagccctttccaacttttacaactctac
cctcctgctggcgatcaacctcaagctatcgcatccttagttcaaggagtcaaagatgga
ctgatgtttcagactttattaggcgtaacaggttctggaaaaacctataccatggcgaat
gtgatcgctgaattaggaagacctgctttgatccttgctcctaataaaaccttggcggca
cagctatacgcggaaatgcgagctttttttcctcgaaatgccgttgaatactttgtttct
tactacgactattatcaacctgaagcttacgttcccactaaagatttatttatcgaaaaa
gattcctctgtcaatgaacaaattgagcagcttcgtttatctgccaccaaaagccttttg
gaacgcagagatacgattatcgtaggcaccgtttctactatctacggtatcggcaatcct
aatgactaccatgccatggtgttaacgttaagaacgggtgatgatattcctcgaaaagag
ttattagcacgcttagttagcatgcaatatcaaagaaacgatattgaattttcaagggga
aattttcgtgttcgtggcgaaatcattgatgttttcccagcagaaaacgcggaacttgcc
ttacgcatcacattgttcgatgatgaaattgaaaaattagaattatttgatcctttaaca
ggcaaagtacaacaaaccacgcctaggttcacgatatacccaagttcccactatgttact
cctcgcgccaccattcttagggccattgaaacgatcaaagaagaactggtcgaacgtggt
aatgaattacgtgccaacaaccgattggtcgaactgcaacgtttagaacaacgaacacgc
tttgatattgagatgttacaagaactggggttttgcaaaggcattgaaaattactctcga
cacctatctggtgcagcacctggtgatcctccccccacactcatcgattacctcccacaa
gacgcactgatgttttttgatgaaagtcacaatatgatgggacagctaggtgcgatgtat
cgaggcgaccgttcgcgtaaagaaaccttggtggaatacggcttcagattaccttctgca
ttggataatcgtcccttaaaatttgaagaatttgaacaaagaatgcaccaaagtattttt
gtttccgctacccctgcaaaatacgagatggagcattcggatcaaatcgtggaacaagtc
gttagaccgacaggattaatcgatccagaaatcatcattcgccccgccctaagtcaagtt
gacgacttattaagcgaagcaaatgctaccatcgcaaaaggtgaaagagtcttggtcacc
acattaaccaaacggatgtccgaagacctcacccagtttttatctgaacatggactaaaa
gtacgttatcttcattctgatattgacaccgttgaacgtgttgaaattattcgtgattta
cgtttaggaaaattcgatatcttagtgggtattaacttattaagagagggattagacatt
ccagaagtcagtttagtagccattcttgatgcggacaaagaaggctttttacgttctgaa
cgcagtcttattcaaaccattgggcgagcagctcgaaacctgcacggaagagccattctg
tatgcggaccatattaccgactccatgaaacgtgccatcgacgaaaccaatcgaagacgg
caaaaacaattagagttcaacaaagttcacggcattattccaaaaggagtcagcaaaaag
atcgatgatttaatcgatggcgttagctcaatttctgatacatctgacacagatactcat
gaacttttccaaggcgatgaaaaagccattgccaaagaaattaaacgattagaaaaacag
atgttagaacatgcgaaaaaccttgagtttgaacaagctgccgctacacgagaccaactt
aatcgactcaaacaacaattactatttgaagcttcctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (24)   

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