KEGG   Bacillus pumilus SAFR-032: BPUM_2247
Entry
BPUM_2247         CDS       T00599                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K18692  ATP-dependent RNA helicase CshB [EC:3.6.4.13]
Organism
bpu  Bacillus pumilus SAFR-032
Brite
KEGG Orthology (KO) [BR:bpu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpu03019]
    BPUM_2247
   03009 Ribosome biogenesis [BR:bpu03009]
    BPUM_2247
Messenger RNA biogenesis [BR:bpu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BPUM_2247
Ribosome biogenesis [BR:bpu03009]
 Prokaryotic type
  rRNA helicases
   BPUM_2247
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_RecD CMS1 AAA_30 AAA_19 AAA_22
Other DBs
NCBI-ProteinID: ABV62916
UniProt: A8FF99
Position
complement(2261226..2262545)
AA seq 439 aa
MNETKFTTYELKSFIIDAIHELGFYEPTDIQKRIIPAVLKGESVIGQSQTGTGKTHAYLL
PLIHSIDPSKEHVQVVITAPTRELANQIFKEAQTILKNASPEEEIKAKLYIGGTDKQKSI
QKLKNQPHLVVGTPGRIADLIHEQALNVYKATSLVIDEADLMLDMGFLEDVDRIGSQMPE
QLQMLVFSATIPEKLKPFLKKYMDNPKYAHVEPKRITAENIQHILVPSKQRDKLKLLHEM
VTNVQPYLGIIFANTKTTVDEIASFLQEKGMKVGVLHGGLTPRERKKVMKQIDDLEFTYI
VASDLAARGIDIKGVSHVINYELPSDLDFYVHRVGRTARAGSSGIAMTIYELADEDALIQ
IEKMGVVFENKTIVHGEWRDADDRLKRQRRKKAPNEIEEKAKRLVRKPKAVKPGYKKKMT
REMDKIKRQERRKSKRNGK
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgaacgaaacaaaatttacgacatatgaattaaagtcttttattatagatgctattcat
gaactgggcttttatgagccaactgatattcaaaaaagaatcatccctgctgtgttaaaa
ggagaaagcgtgattggtcaatcacaaacaggaacaggaaaaacccacgcgtacttattg
ccgctgattcattcaattgatccaagcaaagagcacgtacaagtcgtgattactgcacct
acaagagaattagccaatcaaattttcaaagaagcccaaacgattttaaaaaatgcttct
ccagaagaagagattaaagcaaagctttacattggcggaacggacaagcagaaatccatt
caaaagctaaaaaaccagccgcatttggttgttggtacacctggacgtattgctgacctc
attcatgagcaggcgctgaacgtttacaaagcgacatctctagtcattgatgaagcggat
ttaatgctggatatgggatttttagaagatgtggaccgtattggctcacaaatgccagaa
cagctacaaatgcttgtgttctcagcaacgattccagaaaaactaaaaccgttcctgaaa
aaatatatggacaatccaaaatatgcccatgttgaaccaaaacgaattacagctgaaaac
attcagcatattttagtcccatctaaacaacgtgacaagctaaaattgcttcatgaaatg
gtgacgaatgtacagccttatttaggcatcatttttgccaatacaaaaacaaccgttgat
gaaatcgcatcattcctacaagaaaaaggaatgaaggttggggtgctacacggcggatta
acgccgcgcgaacgtaaaaaagtgatgaagcaaattgatgatttagagttcacttatatt
gtggcatctgatcttgcagcccgcggaattgatattaaaggcgtcagccatgtgatcaac
tatgaacttccatctgatcttgatttttatgttcaccgtgttggtcgaacagctcgagct
ggttcatctggaattgctatgaccatttatgagcttgctgatgaggatgcactcattcaa
atcgagaaaatgggcgttgtgtttgaaaataaaaccattgtacatggcgaatggcgagat
gcagatgaccgcttgaagcgtcaaagacgtaaaaaagcacctaatgaaattgaagaaaaa
gcaaagcgtcttgtgagaaaaccgaaagccgtcaaacctggatataaaaagaaaatgaca
cgtgagatggacaaaatcaaaagacaggaacgtagaaagtcaaagcgtaatggaaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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