KEGG   Bacillus pumilus SH-B9: UP12_00145
Entry
UP12_00145        CDS       T04776                                 
Name
(GenBank) recombinase RecR
  KO
K06187  recombination protein RecR
Organism
bpus  Bacillus pumilus SH-B9
Pathway
bpus03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    UP12_00145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpus03400]
    UP12_00145
DNA repair and recombination proteins [BR:bpus03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     UP12_00145
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      UP12_00145
SSDB
Motif
Pfam: Toprim_4 RecR_HhH Toprim RecR_C RecR_ZnF HHH HHH_5 HHH_8 zf-RING_16
Other DBs
NCBI-ProteinID: AMM95876
UniProt: W8QRX0
Position
31242..31838
AA seq 198 aa
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLSMQEDVVLDFAKALVNAKRNLTYCSVC
GHITDQDPCYICEDTRRDQSVICVVQDPKDVIAMEKMKEYNGLYHVLHGAISPMDGIGPE
DIKIPDLLKRLQDDQVTEVILATNPNIEGEATAMYISRLLKPSGIKLSRIAHGLPVGGDL
EYADEVTLSKALEGRREM
NT seq 597 nt   +upstreamnt  +downstreamnt
atgcaatatcctgaaccaatatcaaagctgattgacagctttatgaaattgccaggaatc
ggaccaaaaactgcggtccgtctggctttttttgttcttagtatgcaggaagatgtcgta
ctagatttcgcgaaggcgcttgttaacgcaaagcgtaatttaacttattgctcggtatgc
ggccatatcacagatcaagatccttgctatatttgtgaagatacaagaagagatcaatct
gttatctgtgtagtgcaagatccaaaagatgtgatcgcaatggaaaagatgaaagaatac
aacggcttatatcatgtgcttcatggtgccatttcgccgatggatggcattggcccagag
gatattaaaattcctgacctgttaaaaagattgcaagacgatcaagtgacagaggtaata
cttgcaaccaatccaaacattgaaggagaggctacagccatgtatatctctagattgttg
aaaccatcaggaattaaactctctcgtattgctcacggactaccagtaggtggagattta
gagtatgcggatgaagtcacactgtctaaagctctagagggcagacgtgagatgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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