KEGG   Paraburkholderia phenoliruptrix: BUPH_02282
Entry
BUPH_02282        CDS       T02300                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bpx  Paraburkholderia phenoliruptrix
Pathway
bpx03030  DNA replication
bpx03430  Mismatch repair
bpx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BUPH_02282
   03430 Mismatch repair
    BUPH_02282
   03440 Homologous recombination
    BUPH_02282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpx03032]
    BUPH_02282
   03400 DNA repair and recombination proteins [BR:bpx03400]
    BUPH_02282
Enzymes [BR:bpx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BUPH_02282
DNA replication proteins [BR:bpx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BUPH_02282
DNA repair and recombination proteins [BR:bpx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BUPH_02282
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_16 AAA_14 AAA_22 AAA_5 DUF3646 AAA_18 Mg_chelatase AAA_assoc_2 TsaE AAA_24 AAA_2 Glyco_tranf_2_5
Other DBs
NCBI-ProteinID: AFT85852
UniProt: K0DM97
Position
1:complement(2055352..2058213)
AA seq 953 aa
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFSK
ALNCETGVSSTPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLEHILGEEKVPYEAQALRLLARAADGSMRDALSLTDQAIAYSANQVNEEAVRGM
LGALDQSYLIRLLDALAQGDGAAVLSVADEMALRSLSFSTALQDLASLLHRIAWAQFAPS
SVLDEWPEAGDLRRFADMLSAEQVQLFYQIATIGRSELGLAPDEYAGFTMTLLRMLAFEP
APAGGASGPGRASGQAGAGGARQTGAPAVAAQPRASASSVALSSGSSAASSAVASIAAPG
RAGSTHPAPVAPSMRDLQKTGSAVASEKATTAAEPTRDGAPPAAVERDGDRAAAPAAESG
TGKPAAPEAGRGIEAEPVSAAPEHAPSVPSPSHGGESAAQGEGFAVSEAASAQALAPWDD
APLEPATTRAPAGAPGAAAPRHPAASNASSETAPLVAAEKSAGAASDASDAASGGTATAP
DATPAAPLASIAPPAELNAPAAAAFMRAEDAAGSAAHENVAASDAPPPRRASGASAALDV
LRSAGLKVSSDRGRASAAATAKLGAAAPAARPAAPRVVVPVPTPGAPRGAAPQPAAAGRA
AGQAGQSAQPAQSTQPAPAAARNDARQTGSPVPPWDDIPPDDYMPLSTSDDGYYGPPDDN
FMPVFDSGPDDVRVNAPAAAPAVDQRPLPPAVPLDPLGFTGDWPALAVDLPLKGISYQLA
FNSELMALEGTTLKLNVPVPQYAETSQVAKLKAALAEKLGQNVDVVVEVGPARRTAAAHD
AAMRAQRQQEAEREISADPFVQSLIREFGASIVPGSIRPITPDAGPNGASQVH
NT seq 2862 nt   +upstreamnt  +downstreamnt
atgacctatcaagttctcgcacgcaaatggcggccgaaggatttcgcgtcgctcgtcgga
caggagcacgtggtgcgcgcgctcacgcacgcgctcgatggcggccgtctgcaccacgcc
tatctgtttaccggcacgcggggcgtcggcaagacgacgctgtcgcgcatcttctcgaag
gcgctgaattgcgaaaccggcgtgagctccacgccgtgcggcgtgtgtcgcgcgtgccgg
gagatcgacgaggggcgctttgtcgactatgtcgagatggacgcggcgagcaaccgcggc
gtcgacgaaatggcggcactgcttgaacgggcggtctatgcgccggtcgacgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctcacgaatcacgccttcaacgccatgctg
aagacgctggaagagccgccgccgcacgtcaaattcattctcgccaccaccgacccgcag
aaaattccggtcacggtgctgtcgcgctgtctgcaattcaatctgaagcagatgccggcg
gggcatatcgtctcgcacctcgaacacattctcggcgaggagaaagtgccgtacgaggcg
caagcattgcgcctcctcgcgcgcgccgccgacggctcgatgcgcgatgcgctttcgctg
accgaccaggccatcgcctattcagccaatcaggtcaatgaagaggcggtgcgcggcatg
ctcggcgcgctcgatcagagctacctgattcgcctgctcgacgcgctcgcgcaaggcgac
ggcgccgcggtgttgtcggtcgccgacgaaatggcgctgcgcagcctgtcgttctccacc
gcgctgcaggatctcgcgagcctgctgcaccgcattgcgtgggcgcagtttgcgccgtcg
tcggtgctcgacgagtggccggaggccggcgacctgcggcgctttgccgacatgctcagc
gccgaacaggtgcagttgttctatcagatcgcgacgatcgggcgcagcgaactcggcctt
gcgccggacgaatacgccggctttacgatgacgctcttgcgcatgctggctttcgagccg
gcgcccgctggcggcgcgtcgggtccgggcagggcgtccggtcaggccggcgcgggtgga
gcgcggcagacgggcgcgcccgcggtggccgcgcagccacgggcgtcggcttcgtctgtg
gctttgtcctctggttcgtctgctgcgtcgtctgctgtcgcttctatcgcggcgccgggc
cgggcgggctcgacccacccggcgccagttgccccgtcgatgcgagatttgcaaaagacg
ggctccgccgtggcatccgagaaggcgaccactgctgctgagccgactcgcgatggtgcc
ccccctgcagccgtcgagcgcgacggggaccgggctgcggcgccagcggctgaaagtggc
accgggaaaccggcggctcctgaagcgggccgagggatcgaggctgagccggtctctgct
gcgcccgagcatgccccgtctgtaccgtcgccgtcgcatggcggcgagtctgcggcgcag
ggtgagggtttcgccgtttcggaggccgcctcggcgcaggcgctcgcgccttgggacgac
gcgccgctcgagcccgcaaccactcgagctccggccggtgcgccgggcgccgcagcgcca
cgacatccagcggccagcaacgcgtcttcggaaacagcgcctcttgttgcagccgaaaaa
tcggctggcgctgcgtccgacgcgtccgacgctgcgtccggcggaacggcaaccgcgccg
gacgccacacccgcggcaccgctggcatcgatcgcaccgcccgccgaactgaacgcaccg
gcggccgccgcgtttatgcgcgcggaggacgccgccggctcggcggcgcatgaaaacgtc
gcggcatccgacgcgccaccgccgcgtcgtgcgagcggtgccagcgccgcgctcgacgtg
ctgcgcagcgccggcctgaaagtgtcgtccgaccgcggtcgtgcgagcgccgcggccacg
gcgaagctaggggcggctgccccggcggcgaggccggccgcgccgcgcgtcgtcgttcct
gtgcccacgcccggcgcgccgcgcggggccgctccgcagcccgcggcggctggccgcgcg
gcggggcaagccgggcaatcggcccagccggcccaatcgacgcagccagcccctgcggcg
gcgcgcaacgacgcccggcaaaccggctcgccggtgccgccgtgggacgacatcccgccc
gacgactacatgccgctttccacatcggacgacggttactacggtccccccgacgacaac
ttcatgccggtgttcgacagcggtccggacgatgtccgcgtcaacgcgccggcggctgcg
cccgccgtcgatcagcgcccgctgccgcccgccgtgccgctcgatccgctcggcttcacg
ggcgactggccggcgctcgccgtcgacctgccgctcaagggcatctcctatcagctcgcg
ttcaacagcgaactcatggcgctcgaaggcaccacgctcaagctgaacgtgcccgtgccg
cagtacgcggaaacctcgcaggtcgcgaagctcaaggcggcgctcgccgagaagctcggt
cagaatgtcgacgtggtggtggaagtcggcccggcgcgccgcaccgcggcggctcacgac
gcggcgatgcgcgcccaacgccagcaggaagcggagcgcgagatcagcgccgatccgttc
gtgcagtcgctgatccgcgaattcggcgcgagcatcgtgccgggctccattcgcccgatt
acgccagacgccggtccgaacggcgcatcccaggttcactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system