KEGG T00765: Bphyt

Burkholderia phytofirmans: Bphyt_2120

Entry

Bphyt_2120 CDS T00765

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

bpy Burkholderia phytofirmans

Pathway

bpy00020	Citrate cycle (TCA cycle)
bpy00310	Lysine degradation
bpy00380	Tryptophan metabolism
bpy01100	Metabolic pathways
bpy01110	Biosynthesis of secondary metabolites
bpy01120	Microbial metabolism in diverse environments

Module

bpy_M00009	Citrate cycle (TCA cycle, Krebs cycle)
bpy_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:bpy00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:bpy00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:bpy00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1:complement(2390768..2393617)

AA seq 949 aa
MEDRFIMLMEKIQSSFLFGGNAPYVEEQYELYLADPASVADEWRAFFDALRETPAIDGSD
RDDEPHAPVVSTFVDLARRSRATQITLDDGLAIARKQVAVQSLIAAYRMIGTRKAKLDPL
LWTPPKASIELTPAFYGLSSADMSTRFSTADTFLFDEDATLQDLVAALEQTYTGTLGAEF
MHLTDAGERRWWQMQLESTRAKPSFSVAEKHRFLERLTAAEGLEKYLHTRYVGQKRFSLE
GGESLIVLLDELVRYGASKKVATVVMGMAHRGRLNVLVNIVGKPLRALFDEFEGKSGDSL
PAGDVKYHKGYSSVTQTDDGPVDVVLAFNPSHLEIVNPVVQGMARAKGDASNERDGSDVL
PVEIHGDAAMSGQGVVMETLSLSYTRGHGTGGTVHVVVNNQIGFTTSDPRDTRSSFYTTD
IAKMIEAPVLHVNADDPEAVAMAVRLALDYRTTFRRSVVIDLVCFRRHGHQEQDTPAITQ
PLMYRAIASHPGVRTVYAQQLIKEGVVTPDQVKDYLEAQRESFEHARESNAVEAADQTDE
IPGWPKFLEDYAGPVQYGPPLSAQVRALAQQVSTVPDGYELHPLVGKMIAARREMAAGNK
RLDWGMGEHMAFASLLSAGIDVRLSGQDSARGTFNHRHAVLHNQTRTSRSEGVYIPLEHI
GEGQGRFTVTNSILSEAAVLAFEYGYSTVNRNALVVWEAQFGDFANGAQVVIDQFIAAGA
AKWGQLSGLTLFLPHGQDGQGPEHASARLERYLQLSAQDNMRVVQPTTPAQLFHLLRMQA
AVFDRRPLVVMTPKSLLRHPEAVSTLDDLATGAFREILVDTQAEPSPASSVERVIVSSGK
VYFDLLEHRRTSGVADTPLIRVEQLYPFPSRQLAAEFARYPNLKTVVWCQEESRNQGAWS
FVEPQLREILPSDAQLRYAGPAASASTAPGYHAVHAARQAALISSAFTD

NT seq 2850 nt +upstreamnt +downstreamnt
atggaggacagattcatcatgttgatggaaaaaattcaaagctcttttctgttcgggggc
aacgcgccctacgtcgaggagcaatacgaactctacctggccgacccggcatcggtcgcg
gatgagtggcgcgcgtttttcgatgcgttgcgcgaaacccccgctatcgacggcagcgac
cgcgatgacgagccgcacgcgccggtcgtttccaccttcgtcgatctggccaggcgctcg
cgcgccacgcagatcacgctcgacgacggcctcgcgatcgccagaaaacaggtggccgtg
cagtcgctgattgccgcgtatcgcatgatcggcacgcgcaaggcgaaactggacccactg
ctgtggacgccgccgaaggcttcgatcgaactcacgccagcgttctatggcctatcgtca
gccgacatgtctacgcgattcagcaccgccgacacgtttcttttcgacgaagacgccacg
ctgcaggacctcgtcgcggcactcgagcagacttacacgggcaccctcggcgccgagttc
atgcatctgaccgatgctggcgaacgacgctggtggcagatgcaactcgagtcgacccgc
gcgaaaccttcgttctcggtagcggagaaacaccgctttctcgaacgtctaacggctgct
gaaggactggagaagtacctgcacacgcgctatgtcgggcaaaagcgtttctcgttggaa
ggcggcgaatcgttgatcgtgttgctggatgaactcgttcgctatggcgcatcgaagaag
gtcgccacggtggtaatgggcatggcgcaccgtgggcgtttgaatgtgctggtgaatatt
gtcggcaagccgttgcgcgcactcttcgacgagttcgagggcaagagcggcgactctctg
ccggccggcgacgtcaaatatcacaagggctacagcagcgtcacgcagacggacgacggg
cccgtcgatgtcgtgctcgcattcaatccctcgcacctggaaatcgtcaacccggtcgtg
cagggcatggctcgcgccaaaggagacgcctcgaacgagcgcgacggtagcgacgtgctg
cccgtcgaaattcacggcgacgcggcaatgtccgggcaaggcgtcgtaatggagacgttg
agcctgtcgtacacgcgcggacacggcacgggcggaaccgtccacgtggtcgtgaacaac
cagatcggctttacgacttcggatccgcgcgatacgcgctcgtcgttctacaccaccgac
atcgcgaagatgatcgaggcgccggttctgcatgtcaacgccgacgacccggaagcagtg
gccatggcggtgcgcctcgcgctcgactatcgcacgacgttcaggcgcagcgtggtgatc
gatcttgtctgtttccgcaggcatgggcatcaggaacaggacacgcccgccatcacgcag
cctctcatgtaccgcgcgattgccagccacccgggcgtgaggaccgtgtacgcccaacag
ttgatcaaggaaggcgtggtgacgccggatcaggtcaaggattacctcgaagcgcagcgc
gaaagcttcgagcacgcgagagagagcaacgctgtcgaggcagcggaccagacggacgaa
atacccggatggccgaagtttctcgaggactatgccggcccggttcagtatgggcctccg
ttgtccgctcaggtgcgtgcgctggcgcagcaggtctcgaccgttccggatggttatgaa
ctgcatccgctggtcggcaagatgatcgccgcacgccgcgagatggccgcgggaaacaag
cggctcgattggggcatgggcgagcacatggcattcgcctcgttgctgagcgccgggatc
gatgtccgcctgagcgggcaggatagcgcgcggggcaccttcaatcaccgtcacgccgtt
ctgcacaaccagacgcgcacgagccgctcggagggcgtctacattccgctggagcatatc
ggcgaggggcaaggccggtttaccgtgacgaactccattctgtcggaggccgccgtgctg
gccttcgagtatggctactcgacggtgaaccgcaatgcgctcgtcgtgtgggaagcgcag
ttcggggacttcgcgaatggtgcgcaggtcgtgatcgatcagttcatcgcggcgggcgcc
gcaaagtgggggcaactcagcgggttgacgctgttcctgccgcacggacaggacgggcag
ggaccggaacacgcgtcggcgaggctcgagcgatatctgcaacttagcgcgcaggacaac
atgcgggtagtccaaccgaccacgcccgcgcaactgttccacttgctgaggatgcaagcg
gctgtcttcgatcgccggccgctcgtcgtgatgacgcccaagtcgctgttgcgtcatccg
gaagccgtcagcacgctcgacgatctggccacgggtgcgttccgcgagattctggtggat
acgcaagccgagccgtcgcctgcgtcgagcgtggagcgcgtgatcgtgtcttctggcaag
gtctatttcgatctgctggaacatcgccgcacgtcgggtgttgccgatacgccgctcatc
cgcgtcgaacagttgtatccgtttccgtcccggcagctcgccgcggagttcgcgcgctat
ccgaatctgaagacggtggtctggtgtcaggaggagtcgcgcaaccagggcgcgtggagc
ttcgtggaaccgcagttgcgtgagatcctgccttcggatgcgcaactgcggtatgcgggg
ccggcggcttccgcgtcgaccgcgcctggttatcacgcggtccacgcggcgaggcaggca
gcgctgatttcgagtgcattcacggactga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BPY (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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