KEGG   Paraburkholderia phytofirmans PsJN: Bphyt_4002
Entry
Bphyt_4002        CDS       T00765                                 
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
  KO
K11004  ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
bpy  Paraburkholderia phytofirmans PsJN
Pathway
bpy02010  ABC transporters
bpy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bpy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Bphyt_4002
   03070 Bacterial secretion system
    Bphyt_4002
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:bpy02000]
    Bphyt_4002
   02044 Secretion system [BR:bpy02044]
    Bphyt_4002
Transporters [BR:bpy02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    Bphyt_4002
Secretion system [BR:bpy02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   Bphyt_4002
SSDB
Motif
Pfam: ABC_membrane Peptidase_C39 cNMP_binding ABC_tran SMC_N Peptidase_C70 AAA_22 AAA_25 Guanylate_cyc_2 AAA_29 nSTAND3 NB-ARC AAA_23 MobB AAA_15 NACHT SbcC_Walker_B DUF87 AAA_21
Other DBs
NCBI-ProteinID: ACD18388
UniProt: B2TE67
Position
2:14550..17606
AA seq 1018 aa
MDAPQTAPSAAEFLTSVEIFSPFSRDEIERLAEYAQARFYSFGETVCSAGETADGLYVIR
SGSVRIFSEEHGKETSLGVRKSGEIFADIAMLRTYVHEASVRSSAKTELLFIPRAAIEPV
IAGNQAALAFVASYVAINSAGGFVAQLFDLRGKLNKAELEEYVRSVGVKRVAAGKEILKQ
DGREDRRLYVVRHGEVRIVRHEEGHDYTLATLGEGEIFGEKACLMRQEQMASVVATTDTR
LLVIPERTVHFILERNPKLREVLDERIRYGDRELQRQKRVEQRRKLPLMLDLQSKPEFGE
KVIKRFALVEQAEEMDCGAACLAMVCRHYSIPMTLGKLRELANVTTQGATLDSLARAGES
LGFTARGVQCTFDSLRGFDLPFIVHWEGYHYVVVYGLSKEYVWVADPAVGFKKMTVEDFE
RGWSGTCLLFTGGPHLLQMSAARSPWIRFVGYLKPYKKILGHLFLATFVIQVLGVIPPLI
IQNILDGVIVHQNVSLLHLLIGGLIISNVFSQLMSSIRAYLANFMVRNMDFAMMSQFFKH
TMSLPFSFFAKRKTGDIFARFQENQTIRAFLTESTVTTALNLLMVFIYFTIMFVYNVKMT
LVLIAFVIPIMALTAIATPKIKGYAREVFTASTESKSFLMEALAGVETIKGMGIERPVRL
RWEKKYAKALEVQYRAHAFNILVGLGSQLLNSATTIAILWVGANLVLAREMTIGQLIAFN
AFMGSVLGPLMGLVGLWSMLNDAGVAMERLGDVLDIEPEQKPQDLPSRVMLPELQGEISL
SGVYFRYGENDSAYVLENISFDIKPGELVAIVGRSGSGKTTLAKLLVGFYTPTEGKMTID
GYDLGVVDKAYYRAQIGYVMQSNLLFSGTISENIASGDDAPDRRRIEEVAKMADAHGFIS
KMPLGYEQIVGERGIGLSGGQIQRLCIARALYHDPRLLVFDEATSALDSQSESNILGNMH
DILKGRTAVIIAHRLSTIMRADKILVLYEGAIVEQGRHDELIQRGGMYYQLVQKQLSA
NT seq 3057 nt   +upstreamnt  +downstreamnt
atggatgcaccccagaccgcgccctccgcagccgagtttctcacctcggtggaaattttt
tcgccgttttcgcgcgacgagatcgagcgtcttgccgaatatgcgcaagcgcgcttctat
tcgttcggagaaacggtttgctcggcgggcgagacggctgacggtctgtacgtgattcgt
tcgggttccgtacggatattctcggaggagcacggcaaggaaaccagcttgggcgtgcgc
aagtcgggtgagatcttcgccgatattgcgatgttgcggacctatgtccacgaagcctcg
gtgcggtcgtcggcaaaaaccgagttgctgtttattccgcgcgccgcgatcgagcctgtg
atcgcgggcaatcaggccgcgttggcgttcgttgccagctatgtggcgatcaattcggcg
ggtggctttgtcgcgcagttattcgatctgcgcggcaaactgaacaaggccgaactcgaa
gagtatgtgcgcagcgtcggcgtgaaacgggtggccgcgggcaaggaaatcctcaagcag
gacggacgcgaggaccggcgcctttacgtggtgcgccatggtgaagtgcgtatcgtgcgg
cacgaggaggggcacgactacacgctcgccacgctcggagaaggcgaaatattcggcgaa
aaggcgtgtttgatgcgccaggaacagatggcgtcggtggttgcgacgaccgacacgcgc
ctgctggtgattccggagcgcaccgttcacttcattctcgaacgcaatccgaagttgcgc
gaagtgctcgacgagcgcattcgctacggcgaccgcgaattgcagcggcaaaagcgggtc
gaacagcgccgcaagctgccgctgatgctcgatttgcaaagcaagcccgagttcggcgag
aaagtcatcaaacgcttcgcgctggtcgagcaggccgaagaaatggattgcggtgcggcg
tgccttgccatggtatgccgccactacagcattccaatgacgctcggaaaattgcgcgaa
ctcgccaacgtcacaacccagggcgcgacgctcgacagtctcgcgcgcgccggcgaatcg
ctcggctttacagcgcgcggcgtgcaatgcacgttcgattcgttgcgcggtttcgatctg
ccgttcatcgtgcattgggagggctatcactacgtcgtggtgtacgggctctccaaagag
tacgtatgggttgcggatccggcggttggcttcaagaaaatgacggtggaagatttcgag
cgcggttggagcggcacctgtctgctgtttaccggtgggccgcatctgctgcaaatgtcc
gccgcgcgttcgccatggatacgctttgtcggctacctcaagccgtacaaaaagattctc
ggccacctgttcctcgccaccttcgtgattcaggtactgggcgtaattccgccgctgatt
atccaaaacattctggacggcgtgatcgttcatcagaatgtcagcctgctgcatctgctg
attggcggcctgatcatttccaatgtcttttcgcaattgatgtcgtcgattcgtgcgtat
ctggcgaatttcatggtgcgaaacatggacttcgcgatgatgtcgcagttcttcaagcac
accatgtcgctgccgttttcgttctttgccaagcgcaagaccggcgacattttcgcgcgc
ttccaggagaaccagacgatccgcgcgttcctcaccgaatccaccgttaccacggcgttg
aacctgctgatggtcttcatctacttcacgatcatgttcgtctacaacgtgaagatgacg
ctggtgctgatcgcgttcgtcattccgatcatggcgctgaccgcgatcgccacgcccaag
atcaaaggctatgcgcgcgaagtgttcaccgcatcgaccgagtcgaagtcgtttctgatg
gaagcgctcgctggtgtggagaccatcaagggcatgggcatcgagcggccggtgcgcttg
cgctgggagaagaagtacgccaaggcgctcgaagtgcagtatcgcgcgcacgcgttcaat
attctcgtgggactcggcagccagttgctgaactcggcgacgacgattgcgattctgtgg
gtcggcgcgaatctcgtgctggcgcgcgaaatgacgattggtcagttgatcgcgttcaat
gcgttcatggggagcgtactgggtccgctcatgggcctggtcggtttgtggagcatgttg
aacgacgcgggcgtggcgatggaacgcctcggcgatgtgctcgatatcgaacccgagcag
aaaccccaggatttgccttcgcgcgtgatgttgcccgaactgcaaggcgagatcagcttg
agcggcgtgtatttccgctatggcgaaaacgactcggcatatgtgctcgaaaacatcagc
ttcgatatcaagcccggcgaactggtggcgattgtcggacgcagcgggtcgggcaagacg
acgctcgccaaattgctggtcggcttctacacgccgaccgagggcaagatgacgatcgac
ggctacgatctcggcgtggtcgacaaagcctattaccgtgcgcagatcggctatgtgatg
cagagcaatttgctgttctccggcacgatttcggagaacatcgcgagtggcgacgatgcg
cccgatcggcgccgcatcgaggaagtcgcgaagatggccgacgcgcacggatttatcagc
aagatgccgcttggctacgagcagattgtcggcgagcgcggaattggcttgtcgggcggg
cagatccagcggctgtgcatcgcgcgggcgctgtatcacgatccgcgtctgctcgtattc
gacgaagcgacttcggcattggactcgcaatcggagagcaatattctcggcaatatgcat
gacattctgaagggccgcacggcggtgatcatcgcgcaccggctcagcacgatcatgcgt
gcggacaagattctcgtgctgtatgaaggggcgattgtcgaacagggccgtcacgatgag
ctgatccagcgcggcggcatgtattaccagctggtccagaaacagttgagtgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (30)   

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