KEGG T00765: Bphyt

Burkholderia phytofirmans: Bphyt_4080

Entry

Bphyt_4080 CDS T00765

Definition

isocitrate dehydrogenase (EC:1.1.1.42)

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

bpy Burkholderia phytofirmans

Pathway

bpy00020	Citrate cycle (TCA cycle)
bpy00480	Glutathione metabolism
bpy01100	Metabolic pathways
bpy01110	Biosynthesis of secondary metabolites
bpy01120	Microbial metabolism in diverse environments
bpy01210	2-Oxocarboxylic acid metabolism
bpy01230	Biosynthesis of amino acids

Module

bpy_M00009	Citrate cycle (TCA cycle, Krebs cycle)
bpy_M00010	Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:bpy00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:bpy00480]

SSDB

Motif

Pfam:

IDH DUF4115 DUF3674

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2:115165..117393

AA seq 742 aa
MSTPPKIIYTLTDEAPALATYSLLPIVKAFTRSSDVIVETRDISLAGRIIAAFPDYLSAE
QKGPDDLAELGGLSTRPEANVIKLPNISASVPQLKAAITELRDQGYKLPAYPDVANTDAE
KDVKARYDKIKGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWSADSKSHVAHMSGG
DFYGSEKSALIGAAGSVKIELTATDGSKTVLKEKTAVQAGEIIDASVLSKNALRSFIEAE
IADAKAKGVLFSVHLKATMMKVSDPIIFGHVVSVFYKDVLTKHADALAQAGFNPNNGIGD
LYARLKDLPAETVAAIEADIKAQYEQRPQLAMVNSDKGITSLHVPSDVIVDASMPAMIRE
SGKMWGADGALHDAKAVIPDRCYAGVYQAVIEDCKKHGAFDPVTMGTVPNVGLMAQAAEE
YGSHDKTFQIPANGVVRVTDAAGTVLIEQQVEAGDIWRMCQTKDAPVQDWVKLAVNRARA
TNTPAVFWLDAARAHDAQIIKKVEQYLKNHDTTGLDIRVMTPVEATKFSIERIRAGKDTI
SVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMFETGAGGSAPKHVQQLVEEGFL
RWDSLGEFLALAASLEHLSSAYHNPKAQVLAKTLDQATGKFLDNDKSPARKVGGIDNRGS
HFYLALYWAEALAAQTEDAALQAQFAGVAKALAENEAKIVEELAAAQGKPVDIGGYYRPN
VELTSKAMRPSATLNKIVDAIA

NT seq 2229 nt +upstreamnt +downstreamnt
atgtccacaccgccgaagatcatctacaccctgaccgacgaagcgcctgctctggcgact
tactcgctgctgccgatcgtgaaggcgttcacgcgctcgtccgacgtgatcgtcgaaacg
cgcgatatttcgcttgccggccggatcatcgctgcattccccgattacctgagcgcggaa
cagaagggtcccgacgatctggcggaactgggtggactcagcacgcgtccggaagcgaat
gtcatcaagctgccgaacatcagcgcgtcggtgccgcaactgaaggccgcgatcaccgaa
ctgcgcgatcagggctacaagctgccggcgtatccggacgtcgcgaacacggacgccgaa
aaagacgtcaaggcgcgctacgacaagatcaagggcagcgcggtcaacccggtgctgcgc
gaaggcaattcggaccgccgcgcgccgctgtcggtcaagaactacgcccgcaagcatccg
cacaagatgggcgcgtggagcgcggactcgaagtcgcacgtcgcgcacatgagcggcggc
gatttctacggtagcgaaaagtcggcgctgatcggcgcagccggttcggtgaagatcgaa
ctgacggcgactgacggttcgaagacagtcctcaaagaaaagacggccgtgcaagcaggc
gagatcatcgacgcttcggtgctgtcgaagaacgcgctgcgcagcttcatcgaagcggaa
atcgccgacgcgaaggccaagggcgtgctgttctcggtgcacctgaaggccaccatgatg
aaggtgtcggacccgatcatcttcggtcacgtggtgtcggtgttctacaaagacgtgctg
accaagcacgccgacgcgctcgcgcaagccggcttcaacccgaacaacggtatcggcgat
ctgtacgcgcgcctgaaagacctgccggctgaaacggtcgccgcgatcgaagccgacatc
aaggcgcaatacgaacagcgtccgcaactggccatggtcaattcggacaagggcatcacc
agcctgcacgtgccgagcgacgtgatcgtcgacgcgtccatgccggccatgatccgcgag
tcgggcaagatgtggggcgcggacggcgcgctgcacgacgccaaggccgtgattccggac
cgctgctacgcaggcgtttatcaggcagtgatcgaagactgcaagaagcacggcgcgttc
gatccggtcacgatgggcacggtgcccaacgtcggcctgatggcgcaagcggctgaagaa
tacggctcacacgacaagacgttccagatcccggcgaacggcgtggttcgcgtgacggac
gcagccggcacggtgctgatcgaacagcaagtggaagcgggcgacatctggcgcatgtgc
cagaccaaggacgcgccggttcaggactgggtcaagctcgcggtcaaccgcgcccgcgct
accaacacgccggccgtgttctggctggatgcggcgcgcgcgcacgacgcccagatcatc
aagaaggtcgagcaatacctgaagaaccacgacaccaccggtctggacattcgcgtcatg
acgccggtcgaagcgaccaagttctcgatcgagcgtattcgcgcgggcaaggacacgatc
tcggtcaccggcaacgtgctgcgcgactacctgaccgacctgttcccgatcatggaactg
ggcacgagcgcgaagatgctgtcgatcgtcccgctgatggctggcggcggcatgttcgaa
accggcgcgggcggttcggcgccgaagcacgttcagcaactggtcgaagaaggtttcctg
cgttgggattcgctcggtgaattcctggcgttggccgcgtcgctcgaacatttgagcagt
gcgtatcacaacccgaaggcgcaggtgctggccaagacgctggatcaggcaaccggcaag
ttcctcgacaacgacaagtcgccggcgcgcaaggttggcggcatcgacaatcgcggcagc
cacttctaccttgcgctctactgggcggaagcactggccgcgcaaaccgaagacgcggcg
ctgcaggcgcaattcgccggcgtggcgaaggcactggctgagaacgaagcgaagatcgtc
gaagaactggctgcggcacaaggcaagccggtggatattggcggttactatcgtccgaat
gtcgaactgacgagcaaggccatgcgcccgagcgccacgctgaacaagatcgtggacgcg
attgcttaa

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BPY (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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