KEGG   Bacillus amyloliquefaciens LL3: LL3_00455
Entry
LL3_00455         CDS       T01835                                 
Symbol
ddl
Name
(GenBank) D-alanyl-D-alanine ligase A
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
bql  Bacillus amyloliquefaciens LL3
Pathway
bql00470  D-Amino acid metabolism
bql00550  Peptidoglycan biosynthesis
bql01100  Metabolic pathways
bql01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:bql00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LL3_00455 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    LL3_00455 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    LL3_00455 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:bql01011]
    LL3_00455 (ddl)
Enzymes [BR:bql01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     LL3_00455 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:bql01011]
 Precursor biosynthesis
  Amino acid ligase
   LL3_00455 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2 ATP-grasp_4 ATPgrasp_ST GARS_A ATP-grasp_3
Other DBs
NCBI-ProteinID: AEB62003
Position
452443..453528
AA seq 361 aa
MKTSLGLVYGGKSAEHNVSLQTALAVTKALNTDKFDIHPIYITEKGEWQRGPLLTEPVSN
VKMLQLEQNGESFALSALNREMFPEASADEKAPIDVVFPLLHGPNGEDGTIQGLLELLNV
PYVGNGVLASSAGMDKVIMKHLFAQAGLPQAKYAAFLKKDWKQTPDSCLQQVEEELGYPC
FVKPANLGSSVGISKCRNREELEKAFELAFEYDRKIVVEEGIAGREIEIGVLGNDEPKCS
AVGEIAPKTDFYDYKAKYEDGDTDLMIPAQVTDEQYAEISEMAIKAFKAIDGSGLVRADF
FLTNDGQVLINEVNTMPGFTPFSMFPLLWKEAGVDYSDLIEQLVELAKERHAEKQLIKHT
F
NT seq 1086 nt   +upstreamnt  +downstreamnt
ttgaaaacaagtctaggattggtgtacggcggaaagtcagctgaacacaatgtatcgctt
cagacagcacttgctgtaacaaaagcgcttaatactgataagtttgatatacatccgatt
tacatcacggaaaaaggagaatggcaaagaggtccgcttctgactgaaccggtttccaac
gtgaaaatgctgcagctggaacaaaatggtgaaagtttcgctctttccgcattgaaccgg
gaaatgtttcctgaagcgtcggctgatgaaaaggcgccgattgacgtcgttttcccgctt
ctccacggaccgaacggtgaggacggcacgatccagggccttcttgaattgctgaacgtt
ccttatgtcggcaacggagtgcttgcgtcatcagcgggcatggataaagtcatcatgaag
catttgttcgctcaagcggggcttccgcaggcgaagtacgccgctttcttaaaaaaggat
tggaaacagactccggacagctgcttacagcaggttgaagaggaactggggtatccatgc
tttgtcaaaccggcgaacctcggttcaagtgtcggaatcagcaaatgccgaaaccgcgaa
gagcttgaaaaagcctttgaactggcttttgagtatgaccggaaaattgttgtcgaagaa
ggaatcgccggcagagaaattgaaatcggcgtgctcggaaatgacgaaccgaaatgctcc
gccgtcggtgaaatcgcgccaaaaaccgatttttacgactacaaagcgaaatacgaagac
ggcgacacggatttaatgattcccgcgcaagtgacggatgaacaatacgcggaaatcagc
gagatggcgattaaagccttcaaagcgattgacggctcaggccttgtccgcgccgatttc
ttcctgaccaatgacggtcaagtgctcattaacgaagtgaacacaatgccgggctttacg
ccattcagcatgttcccgctgctatggaaagaagccggcgtagattacagtgatctgatt
gaacagcttgttgagctggcaaaagagcgccatgccgagaaacagctgattaaacataca
ttttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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