KEGG T01835: LL3

Bacillus amyloliquefaciens LL3: LL3_02285

Entry

LL3_02285 CDS T01835

Gene name

ligB

Definition

SPBc2 prophage-derived DNA ligase-like protein ligB

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

bql Bacillus amyloliquefaciens LL3

Pathway

bql03410	Base excision repair
bql03420	Nucleotide excision repair
bql03430	Mismatch repair
bql03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:bql03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:bql03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:bql03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:bql03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M mRNA_cap_enzyme DNA_ligase_A_C LTD

Other DBs

NCBI-GI:

384164670

NCBI-GeneID:

12203315

UniProt:

F4ENE9

Position

2187284..2188096

AA seq 270 aa
MFVSPMLLHSIKEPFDDDDYITELKFDGIRLILSKFNDQIKLYTRHNNEVTSKFPELLDL
DIPNGTVLDGEIIVATPGGAPDFEAVMERFMSKKSAHKVVYCVFDVVYIDGHSIANKPLT
ERKSMLSDLNLDHDNVFVIEGLQGNGLAYFNLAKEKNLEGIVLKKANSPYEINKRSHSWL
KVINYDYTDVLITGYTKEDIKFLLSYPDGTTAGFMEFMPNAERSKFHSMKQVKSESDEYV
FVEPILCKVKHRFKTKHGKLRIPSFESWRV

NT seq 813 nt +upstreamnt +downstreamnt
ttgtttgtatcgccaatgttattgcattcaatcaaagaaccatttgatgacgatgattat
attaccgagctgaagtttgatggaattagactgatcctctccaagtttaatgatcagata
aagctttatactcgtcacaacaatgaagtaacaagcaagttcccagaactgttggatctt
gatatacccaatggaactgttttagacggtgaaatcattgtagctaccccaggcggtgcc
cctgatttcgaagcagtcatggaacgctttatgtctaagaaatcagctcataaggtggtt
tactgtgtattcgatgtagtttatattgatggacattcaatcgctaataagccgctcact
gaacgtaagagcatgctttcagacctaaaccttgaccacgataatgtctttgtgatcgaa
ggcctgcaaggaaacggattagcttacttcaatctggccaaagaaaagaatttagaggga
atcgtactaaagaaagctaactccccttatgaaatcaataaacgttcccatagctggctg
aaagtgattaattatgattacacagatgtgcttatcactggctacaccaaagaggatata
aagtttcttctgtcttatcctgatggtacaacagctggatttatggaattcatgccgaat
gcggaacgaagtaagttccactctatgaaacaagtaaagtctgaatctgatgaatatgta
tttgtagaaccgatcttatgtaaggttaaacacagatttaagactaagcatggcaaactc
cgtataccttcctttgaatcctggagagtctaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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